RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 RASA3Q14644 834 aa12.21□□□□□ -0.45
NF1-203ENST00000422121 NBPF12Q5TAG4 269 aaPredicted RBP12.21□□□□□ -0.45
NF1-203ENST00000422121 TBC1D9Q6ZT07 1266 aa12.21□□□□□ -0.45
NF1-203ENST00000422121 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
NF1-203ENST00000422121 CCDC8Q9H0W5 538 aaPredicted RBP12.21□□□□□ -0.45
NF1-203ENST00000422121 DAGLAQ9Y4D2 1042 aa12.21□□□□□ -0.45
NF1-203ENST00000422121 C2orf69Q8N8R5 385 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
NF1-203ENST00000422121 SPATA5Q8NB90 893 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
NF1-203ENST00000422121 VEZTQ9HBM0 779 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 WBP1LQ9NX94 342 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
NF1-203ENST00000422121 LDHBP07195 334 aaKnown RBP12.19□□□□□ -0.46
NF1-203ENST00000422121 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
NF1-203ENST00000422121 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
NF1-203ENST00000422121 FKBP1BP68106 108 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 OS9Q13438 667 aaPredicted RBP12.19□□□□□ -0.46
NF1-203ENST00000422121 LDLRAD1Q5T700 205 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 RGMBQ6NW40 437 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 RHPN1Q8TCX5 695 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 ZNF512BQ96KM6 892 aaPredicted RBP12.19□□□□□ -0.46
NF1-203ENST00000422121 TMEM39BQ9GZU3 492 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 IL1RAPL2Q9NP60 686 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 SNRKQ9NRH2 765 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 THSD7BQ9C0I4 1608 aa12.19□□□□□ -0.46
NF1-203ENST00000422121 GAKO14976 1311 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 TCP10L2B9ZVM9 353 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 MYO1BO43795 1136 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
NF1-203ENST00000422121 CYP2E1P05181 493 aaPredicted RBP12.18□□□□□ -0.46
NF1-203ENST00000422121 ECE1P42892 770 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 MECOMQ03112 1051 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 GRM1Q13255 1194 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 PRKG1Q13976 671 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 CDC42EP5Q6NZY7 148 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 FAM163AQ96GL9 167 aaPredicted RBP12.18□□□□□ -0.46
NF1-203ENST00000422121 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
NF1-203ENST00000422121 FOXN1O15353 648 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 MAP2K2P36507 400 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 ZNF157P51786 506 aaPredicted RBP12.17□□□□□ -0.46
NF1-203ENST00000422121 NFIAQ12857 509 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 ZFPM1Q8IX07 1006 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 NSUN4Q96CB9 384 aaKnown RBP12.17□□□□□ -0.46
NF1-203ENST00000422121 DCBLD2Q96PD2 775 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 PPP2R3BQ9Y5P8 575 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
NF1-203ENST00000422121 MAST3O60307 1309 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 SLC10A3P09131 477 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 ZAP70P43403 619 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 FKBP1CQ5VVH2 108 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 ERC1Q8IUD2 1116 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 CRBNQ96SW2 442 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 PIH1D3Q9NQM4 214 aaKnown RBP12.16□□□□□ -0.46
NF1-203ENST00000422121 FAM198AQ9UFP1 575 aa12.16□□□□□ -0.46
NF1-203ENST00000422121 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 APBB1O00213 710 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 HMMRO75330 724 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 RHBDL3P58872 404 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 KIF23Q02241 960 aaPredicted RBP12.15□□□□□ -0.46
NF1-203ENST00000422121 CCDC158Q5M9N0 1113 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 ADGRA1Q86SQ6 560 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 FAM83AQ86UY5 434 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 AACSQ86V21 672 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
NF1-203ENST00000422121 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 KIF1BPQ96EK5 621 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 CSRNP1Q96S65 589 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
NF1-203ENST00000422121 ANTXR1Q9H6X2 564 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 DCTPP1Q9H773 170 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
NF1-203ENST00000422121 RFX7Q2KHR2 1363 aa12.15□□□□□ -0.46
NF1-203ENST00000422121 STK25O00506 426 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 RAB11FIP3O75154 756 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 SLURP2P0DP57 97 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 CLCN6P51797 869 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 NOGQ13253 232 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
NF1-203ENST00000422121 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 SPTY2D1Q68D10 685 aaPredicted RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms