RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 Q6ZUG5 572 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 TMX3Q96JJ7 454 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 ARPP21Q9UBL0 812 aaPredicted RBP8.7□□□□□ -1.02
BDNF-209ENST00000420794 MTMR7Q9Y216 660 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 SUGT1Q9Y2Z0 365 aa8.7□□□□□ -1.02
BDNF-209ENST00000420794 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.7□□□□□ -1.02
BDNF-209ENST00000420794 RPAP1Q9BWH6 1393 aaPredicted RBP8.7□□□□□ -1.02
BDNF-209ENST00000420794 MPHOSPH10O00566 681 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 RPS6KB1P23443 525 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 PRDX5P30044 214 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 BTDP43251 543 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 WTAPQ15007 396 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 DLGAP5Q15398 846 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 PPP4R3BQ5MIZ7 849 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 TDRD7Q8NHU6 1098 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 TCEANC2Q96MN5 208 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 VIRMAQ69YN4 1812 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 PAPPAQ13219 1627 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 C4BP0C0L5 1744 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 GOLGA8BA8MQT2 603 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 ECE2O60344 883 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 TSPY3P0CV98 308 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 TSPY8P0CW00 308 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 AK2P54819 239 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 SLC4A8Q2Y0W8 1093 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 LARP1BQ659C4 914 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 TGFBRAP1Q8WUH2 860 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 STRBPQ96SI9 672 aaKnown RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 USP40Q9NVE5 1235 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 TNNI2P48788 182 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 AOC3Q16853 763 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 CTCFLQ8NI51 663 aaPredicted RBP8.69□□□□□ -1.02
BDNF-209ENST00000420794 SDR42E1Q8WUS8 393 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 MED23Q9ULK4 1368 aa8.69□□□□□ -1.02
BDNF-209ENST00000420794 MYO3BQ8WXR4 1341 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 WDR33Q9C0J8 1336 aaKnown RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 USP17L12C9JPN9 530 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 USP17L21D6R901 530 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 E7EWF7 191 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 SCNN1DP51172 638 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 NECTIN1Q15223 517 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 WASF1Q92558 559 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 TMEM87BQ96K49 555 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 LARP6Q9BRS8 491 aaKnown RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 LRRC2Q9BYS8 371 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 CABP5Q9NP86 173 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 POLLQ9UGP5 575 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 PALD1Q9ULE6 856 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 RIC1Q4ADV7 1423 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 KDM4AO75164 1064 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 PPARAQ07869 468 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 MAPKAPK5Q8IW41 473 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 LCORLQ8N3X6 602 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 UPF1Q92900 1129 aaKnown RBP eCLIP8.68□□□□□ -1.02
BDNF-209ENST00000420794 BRMS1Q9HCU9 246 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 CD2APQ9Y5K6 639 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 KLF18A0A0U1RQI7 1052 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 GOLGA8AA7E2F4 631 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 CYP21A2P08686 494 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 PCP11498 1178 aaKnown RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 GPR162Q16538 588 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 RBM26Q5T8P6 1007 aaKnown RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
BDNF-209ENST00000420794 CTDP1Q9Y5B0 961 aaPredicted RBP8.68□□□□□ -1.02
BDNF-209ENST00000420794 B4E1Z4 1266 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 DYNLL1P63167 89 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 IFIT1BQ5T764 474 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 CIAPIN1Q6FI81 312 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 ZSWIM6Q9HCJ5 1215 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 ZBTB43O43298 467 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 RAD17O75943 681 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 KLRK1P26718 216 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 KIF5BP33176 963 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 METAP2P50579 478 aaKnown RBP eCLIP8.67□□□□□ -1.02
BDNF-209ENST00000420794 SF3A1Q15459 793 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 STRIP1Q5VSL9 837 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 GIMAP6Q6P9H5 292 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 SAP30BPQ9UHR5 308 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 STX8Q9UNK0 236 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 H7C1D1 291 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 CPA1P15085 419 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 ZRSR1Q15695 479 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
BDNF-209ENST00000420794 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 MICU3Q86XE3 530 aa8.67□□□□□ -1.02
BDNF-209ENST00000420794 NSUN4Q96CB9 384 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms