RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-202ENST00000419300 DDX23Q9BUQ8 820 aaKnown RBP11.28□□□□□ -0.6
LINC00963-202ENST00000419300 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 PTPRKQ15262 1439 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
LINC00963-202ENST00000419300 GUCY1B3Q02153 619 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 GRIPAP1Q4V328 841 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 IL15P40933 162 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-202ENST00000419300 PLCD1P51178 756 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 HECW2Q9P2P5 1572 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 IQGAP1P46940 1657 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 GOLGA8KD6RF30 607 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 RHOXF2BP0C7M4 288 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 CFAP221Q4G0U5 840 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
LINC00963-202ENST00000419300 SELENOSQ9BQE4 189 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 ANKRD26Q9UPS8 1709 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 CAPZA3Q96KX2 299 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 GLT8D2Q9H1C3 349 aa11.28□□□□□ -0.6
LINC00963-202ENST00000419300 TRPC3Q13507 836 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.6
LINC00963-202ENST00000419300 MAP3K21Q5TCX8 1036 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 TACO1Q9BSH4 297 aaKnown RBP11.27□□□□□ -0.6
LINC00963-202ENST00000419300 BCAP29Q9UHQ4 241 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 CDC42BPGQ6DT37 1551 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 PPP1R7Q15435 360 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 ARMC9Q7Z3E5 817 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 MLKLQ8NB16 471 aa11.27□□□□□ -0.6
LINC00963-202ENST00000419300 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 CNGA1P29973 690 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 APBA1Q02410 837 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 KIFAP3Q92845 792 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 RPS6KB1P23443 525 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 SF3B2Q13435 895 aaKnown RBP11.27□□□□□ -0.61
LINC00963-202ENST00000419300 MAP7D1Q3KQU3 841 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 GSTA5Q7RTV2 222 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 RRAGDQ9NQL2 400 aaPredicted RBP11.27□□□□□ -0.61
LINC00963-202ENST00000419300 MYOM2P54296 1465 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 SYNCQ9H7C4 482 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 UBE3BQ7Z3V4 1068 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
LINC00963-202ENST00000419300 HLA-DOAP06340 250 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 OAS2P29728 719 aaKnown RBP11.27□□□□□ -0.61
LINC00963-202ENST00000419300 MIS18AQ9NYP9 233 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
LINC00963-202ENST00000419300 F6X3S4 739 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 CUTAO60888 179 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 MYO1AQ9UBC5 1043 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 RBM5P52756 815 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00963-202ENST00000419300 ZSCAN26Q16670 478 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 DENND2CQ68D51 928 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-202ENST00000419300 PAIP2Q9BPZ3 127 aaKnown RBP11.26□□□□□ -0.61
LINC00963-202ENST00000419300 RAB17Q9H0T7 212 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 RBSNQ9H1K0 784 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 LDHCP07864 332 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-202ENST00000419300 PLCG2P16885 1265 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 PHLPP2Q6ZVD8 1323 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 PCK1P35558 622 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 FRMD4BQ9Y2L6 1034 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 ZPR1O75312 459 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 ZNF365Q70YC5 407 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 EFCAB13Q8IY85 973 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 AFAP1L2Q8N4X5 818 aa11.26□□□□□ -0.61
LINC00963-202ENST00000419300 PRC1O43663 620 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 AFMP43652 599 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 NLRP12P59046 1061 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 MAP7Q14244 749 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 MRFAP1L1Q96HT8 127 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 SEC62Q99442 399 aaKnown RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 IMPG2Q9BZV3 1241 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 SNRPA1P09661 255 aaKnown RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 CCDC8Q9H0W5 538 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 FEZ2Q9UHY8 353 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 IFT81Q8WYA0 676 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 HOXB7P09629 217 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 I3L4J1 428 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 CCDC84Q86UT8 332 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 PTPDC1A2A3K4 754 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 PABPN1LA6NDY0 278 aaKnown RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 CFAP157Q5JU67 520 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 NMIQ13287 307 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 CEP85LQ5SZL2 805 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 RNF10Q8N5U6 811 aaKnown RBP11.25□□□□□ -0.61
LINC00963-202ENST00000419300 TRIM58Q8NG06 486 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 LMBRD1Q9NUN5 540 aa11.25□□□□□ -0.61
LINC00963-202ENST00000419300 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
LINC00963-202ENST00000419300 SPINK5Q9NQ38 1064 aaPredicted RBP11.24□□□□□ -0.61
LINC00963-202ENST00000419300 CTNND2Q9UQB3 1225 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms