RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 GAKO14976 1311 aa24.96■■□□□ 1.59
GTF3A-202ENST00000419181 KIF23Q02241 960 aaPredicted RBP24.96■■□□□ 1.59
GTF3A-202ENST00000419181 CCDC158Q5M9N0 1113 aa24.96■■□□□ 1.59
GTF3A-202ENST00000419181 FAM83AQ86UY5 434 aa24.96■■□□□ 1.59
GTF3A-202ENST00000419181 DZIP1Q86YF9 867 aaKnown RBP24.96■■□□□ 1.59
GTF3A-202ENST00000419181 TLR7Q9NYK1 1049 aaKnown RBP24.96■■□□□ 1.59
GTF3A-202ENST00000419181 OTOFQ9HC10 1997 aa24.95■■□□□ 1.58
GTF3A-202ENST00000419181 TTC39AQ5SRH9 613 aa24.95■■□□□ 1.58
GTF3A-202ENST00000419181 CDC42EP5Q6NZY7 148 aa24.95■■□□□ 1.58
GTF3A-202ENST00000419181 ZNF512BQ96KM6 892 aaPredicted RBP24.95■■□□□ 1.58
GTF3A-202ENST00000419181 RPAP1Q9BWH6 1393 aaPredicted RBP24.94■■□□□ 1.58
GTF3A-202ENST00000419181 ERICH6Q7L0X2 663 aa24.94■■□□□ 1.58
GTF3A-202ENST00000419181 FAM163AQ96GL9 167 aaPredicted RBP24.94■■□□□ 1.58
GTF3A-202ENST00000419181 CCDC8Q9H0W5 538 aaPredicted RBP24.94■■□□□ 1.58
GTF3A-202ENST00000419181 UNCXA6NJT0 531 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 CA12O43570 354 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 USP2O75604 605 aaPredicted RBP24.93■■□□□ 1.58
GTF3A-202ENST00000419181 MECOMQ03112 1051 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 TBC1D9Q6ZT07 1266 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 SLF2Q8IX21 1173 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 RHPN1Q8TCX5 695 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 ZNF384Q8TF68 577 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 TSKSQ9UJT2 592 aa24.93■■□□□ 1.58
GTF3A-202ENST00000419181 IREB2P48200 963 aaKnown RBP24.92■■□□□ 1.58
GTF3A-202ENST00000419181 MAST2Q6P0Q8 1798 aa24.91■■□□□ 1.58
GTF3A-202ENST00000419181 RRP1P56182 461 aaKnown RBP24.91■■□□□ 1.58
GTF3A-202ENST00000419181 AACSQ86V21 672 aa24.91■■□□□ 1.58
GTF3A-202ENST00000419181 NSUN4Q96CB9 384 aaKnown RBP24.91■■□□□ 1.58
GTF3A-202ENST00000419181 CSRNP1Q96S65 589 aa24.91■■□□□ 1.58
GTF3A-202ENST00000419181 SNRKQ9NRH2 765 aa24.91■■□□□ 1.58
GTF3A-202ENST00000419181 USP40Q9NVE5 1235 aa24.91■■□□□ 1.58
GTF3A-202ENST00000419181 MROH7-TTC4A0A0A0MT08 1334 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 CAPN15O75808 1086 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 NFIAQ12857 509 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 REM2Q8IYK8 340 aaPredicted RBP24.9■■□□□ 1.58
GTF3A-202ENST00000419181 FAM151AQ8WW52 585 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 KIF1BPQ96EK5 621 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 CLMNQ96JQ2 1002 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 IL1RAPL2Q9NP60 686 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 RFX7Q2KHR2 1363 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 LAMB1P07942 1786 aa24.9■■□□□ 1.58
GTF3A-202ENST00000419181 ANKRD13AQ8IZ07 590 aa24.89■■□□□ 1.58
GTF3A-202ENST00000419181 RAI14Q9P0K7 980 aa24.89■■□□□ 1.58
GTF3A-202ENST00000419181 FAM198AQ9UFP1 575 aa24.89■■□□□ 1.58
GTF3A-202ENST00000419181 MYO5AQ9Y4I1 1855 aaKnown RBP24.89■■□□□ 1.57
GTF3A-202ENST00000419181 RAB11FIP3O75154 756 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 CYP2E1P05181 493 aaPredicted RBP24.88■■□□□ 1.57
GTF3A-202ENST00000419181 BTDP43251 543 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 GSTO1P78417 241 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 SPRYD7Q5W111 196 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 SLC10A4Q96EP9 437 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 LRP2BPQ9P2M1 347 aa24.88■■□□□ 1.57
GTF3A-202ENST00000419181 GPR75-ASB3A0A0A6YYF3 556 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 APBB1O00213 710 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 ZAP70P43403 619 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 CLASRPQ8N2M8 674 aaKnown RBP24.87■■□□□ 1.57
GTF3A-202ENST00000419181 HOOK2Q96ED9 719 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 IDI2Q9BXS1 227 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 SAGE1Q9NXZ1 904 aa24.87■■□□□ 1.57
GTF3A-202ENST00000419181 LDHCP07864 332 aa24.86■■□□□ 1.57
GTF3A-202ENST00000419181 TCP10Q12799 353 aa24.86■■□□□ 1.57
GTF3A-202ENST00000419181 MKRN3Q13064 507 aaKnown RBP24.86■■□□□ 1.57
GTF3A-202ENST00000419181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.86■■□□□ 1.57
GTF3A-202ENST00000419181 AK9Q5TCS8 1911 aa24.86■■□□□ 1.57
GTF3A-202ENST00000419181 ZBTB48P10074 688 aaPredicted RBP24.85■■□□□ 1.57
GTF3A-202ENST00000419181 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.85■■□□□ 1.57
GTF3A-202ENST00000419181 WNK4Q96J92 1243 aa24.85■■□□□ 1.57
GTF3A-202ENST00000419181 RNF186Q9NXI6 227 aa24.85■■□□□ 1.57
GTF3A-202ENST00000419181 DOCK2Q92608 1830 aa24.84■■□□□ 1.57
GTF3A-202ENST00000419181 IGSF3O75054 1194 aa24.84■■□□□ 1.57
GTF3A-202ENST00000419181 ENTPD3O75355 529 aa24.84■■□□□ 1.57
GTF3A-202ENST00000419181 WDHD1O75717 1129 aaPredicted RBP24.84■■□□□ 1.57
GTF3A-202ENST00000419181 RGS3P49796 1198 aa24.84■■□□□ 1.57
GTF3A-202ENST00000419181 RHBDL3P58872 404 aa24.84■■□□□ 1.57
GTF3A-202ENST00000419181 PIH1D3Q9NQM4 214 aaKnown RBP24.84■■□□□ 1.57
GTF3A-202ENST00000419181 TM4SF4P48230 202 aa24.83■■□□□ 1.57
GTF3A-202ENST00000419181 MAP3K9P80192 1104 aa24.83■■□□□ 1.57
GTF3A-202ENST00000419181 VGLL4Q14135 290 aa24.83■■□□□ 1.57
GTF3A-202ENST00000419181 DCAF15Q66K64 600 aa24.83■■□□□ 1.57
GTF3A-202ENST00000419181 ZFPM1Q8IX07 1006 aa24.83■■□□□ 1.57
GTF3A-202ENST00000419181 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.83■■□□□ 1.57
GTF3A-202ENST00000419181 TRPA1O75762 1119 aa24.82■■□□□ 1.56
GTF3A-202ENST00000419181 MAP4K4O95819 1239 aaPredicted RBP24.82■■□□□ 1.56
GTF3A-202ENST00000419181 SREBF2Q12772 1141 aa24.82■■□□□ 1.56
GTF3A-202ENST00000419181 DDX4Q9NQI0 724 aaKnown RBP24.82■■□□□ 1.56
GTF3A-202ENST00000419181 IFIT2P09913 472 aaKnown RBP24.81■■□□□ 1.56
GTF3A-202ENST00000419181 GJA5P36382 358 aa24.81■■□□□ 1.56
GTF3A-202ENST00000419181 NAA16Q6N069 864 aaPredicted RBP24.81■■□□□ 1.56
GTF3A-202ENST00000419181 WRNIP1Q96S55 665 aa24.81■■□□□ 1.56
GTF3A-202ENST00000419181 ELP3Q9H9T3 547 aa24.81■■□□□ 1.56
GTF3A-202ENST00000419181 NDUFB9Q9Y6M9 179 aa24.81■■□□□ 1.56
GTF3A-202ENST00000419181 ATRNL1Q5VV63 1379 aa24.8■■□□□ 1.56
GTF3A-202ENST00000419181 NPM3O75607 178 aaKnown RBP24.8■■□□□ 1.56
GTF3A-202ENST00000419181 MIGA2Q7L4E1 593 aa24.8■■□□□ 1.56
GTF3A-202ENST00000419181 ZNF341Q9BYN7 854 aa24.8■■□□□ 1.56
GTF3A-202ENST00000419181 CSADQ9Y600 493 aa24.8■■□□□ 1.56
GTF3A-202ENST00000419181 CASP8AP2Q9UKL3 1982 aa24.8■■□□□ 1.56
GTF3A-202ENST00000419181 MANSC4A6NHS7 340 aaPredicted RBP24.79■■□□□ 1.56
GTF3A-202ENST00000419181 PICALMQ13492 652 aa24.79■■□□□ 1.56
GTF3A-202ENST00000419181 SH3BP5LQ7L8J4 393 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms