RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ABCF2Q9UG63 623 aa25.37■■□□□ 1.65
PKNOX1-202ENST00000418336 MECOMQ03112 1051 aa25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 NSUN4Q96CB9 384 aaKnown RBP25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 CLMNQ96JQ2 1002 aa25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 CSRNP1Q96S65 589 aa25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 FAM198AQ9UFP1 575 aa25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 MYO5AQ9Y4I1 1855 aaKnown RBP25.36■■□□□ 1.65
PKNOX1-202ENST00000418336 CTCFP49711 727 aaPredicted RBP25.35■■□□□ 1.65
PKNOX1-202ENST00000418336 RRP1P56182 461 aaKnown RBP25.35■■□□□ 1.65
PKNOX1-202ENST00000418336 TTLL12Q14166 644 aaPredicted RBP25.35■■□□□ 1.65
PKNOX1-202ENST00000418336 GORABQ5T7V8 394 aa25.35■■□□□ 1.65
PKNOX1-202ENST00000418336 MAST2Q6P0Q8 1798 aa25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 CYP2E1P05181 493 aaPredicted RBP25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 ERC1Q8IUD2 1116 aa25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 AIDAQ96BJ3 306 aa25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 PRDM10Q9NQV6 1147 aa25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 MROH7-TTC4A0A0A0MT08 1334 aa25.34■■□□□ 1.65
PKNOX1-202ENST00000418336 ATRNL1Q5VV63 1379 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 UNCXA6NJT0 531 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 TNNI2P48788 182 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 LBX1P52954 281 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 RHBDL3P58872 404 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 ZFPM1Q8IX07 1006 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 IDI2Q9BXS1 227 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 IL1RAPL2Q9NP60 686 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 SNRKQ9NRH2 765 aa25.33■■□□□ 1.65
PKNOX1-202ENST00000418336 GPR75-ASB3A0A0A6YYF3 556 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 PPP1R12BO60237 982 aaPredicted RBP25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 GJA5P36382 358 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 ZAP70P43403 619 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 HSP90AB4PQ58FF6 505 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 CCDC158Q5M9N0 1113 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 TTC39AQ5SRH9 613 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 SPTY2D1Q68D10 685 aaPredicted RBP25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 FAM151AQ8WW52 585 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 USP40Q9NVE5 1235 aa25.32■■□□□ 1.64
PKNOX1-202ENST00000418336 HMMRO75330 724 aa25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 WDHD1O75717 1129 aaPredicted RBP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 SPRYD7Q5W111 196 aa25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 DZIP1Q86YF9 867 aaKnown RBP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 DDX4Q9NQI0 724 aaKnown RBP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 PIH1D3Q9NQM4 214 aaKnown RBP25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 TSKSQ9UJT2 592 aa25.31■■□□□ 1.64
PKNOX1-202ENST00000418336 DOCK2Q92608 1830 aa25.3■■□□□ 1.64
PKNOX1-202ENST00000418336 BTDP43251 543 aa25.3■■□□□ 1.64
PKNOX1-202ENST00000418336 SH3BP5LQ7L8J4 393 aa25.3■■□□□ 1.64
PKNOX1-202ENST00000418336 AACSQ86V21 672 aa25.3■■□□□ 1.64
PKNOX1-202ENST00000418336 KIF1BPQ96EK5 621 aa25.29■■□□□ 1.64
PKNOX1-202ENST00000418336 RNF186Q9NXI6 227 aa25.29■■□□□ 1.64
PKNOX1-202ENST00000418336 TMOD2Q9NZR1 351 aa25.29■■□□□ 1.64
PKNOX1-202ENST00000418336 CA12O43570 354 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 RAB11FIP3O75154 756 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 IREB2P48200 963 aaKnown RBP25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 TM4SF4P48230 202 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 ADGRA1Q86SQ6 560 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 WNK4Q96J92 1243 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 SAGE1Q9NXZ1 904 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 PCDHB15Q9Y5E8 787 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 NDUFB9Q9Y6M9 179 aa25.28■■□□□ 1.64
PKNOX1-202ENST00000418336 ANKRD13AQ8IZ07 590 aa25.27■■□□□ 1.64
PKNOX1-202ENST00000418336 RGS3P49796 1198 aa25.26■■□□□ 1.63
PKNOX1-202ENST00000418336 TCP10Q12799 353 aa25.26■■□□□ 1.63
PKNOX1-202ENST00000418336 MKRN3Q13064 507 aaKnown RBP25.26■■□□□ 1.63
PKNOX1-202ENST00000418336 REM2Q8IYK8 340 aaPredicted RBP25.26■■□□□ 1.63
PKNOX1-202ENST00000418336 ANTXR1Q9H6X2 564 aa25.26■■□□□ 1.63
PKNOX1-202ENST00000418336 APBB1O00213 710 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 ENTPD3O75355 529 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 ZBTB48P10074 688 aaPredicted RBP25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 VGLL4Q14135 290 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 SLF2Q8IX21 1173 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 BEGAINQ9BUH8 593 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 RAI14Q9P0K7 980 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 ZNF112Q9UJU3 913 aa25.25■■□□□ 1.63
PKNOX1-202ENST00000418336 CDK5RAP2Q96SN8 1893 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 CNKSR2Q8WXI2 1034 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 SLC10A4Q96EP9 437 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 DCTPP1Q9H773 170 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 LRP2BPQ9P2M1 347 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 SNCAIPQ9Y6H5 919 aa25.24■■□□□ 1.63
PKNOX1-202ENST00000418336 DDTLA6NHG4 134 aaPredicted RBP25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 IGSF3O75054 1194 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 NPM3O75607 178 aaKnown RBP25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 GSTO1P78417 241 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 MAP3K9P80192 1104 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 MAP3K10Q02779 954 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 CLASRPQ8N2M8 674 aaKnown RBP25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 ELP3Q9H9T3 547 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 FOCADQ5VW36 1801 aa25.23■■□□□ 1.63
PKNOX1-202ENST00000418336 SLURP2P0DP57 97 aa25.22■■□□□ 1.63
PKNOX1-202ENST00000418336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.22■■□□□ 1.63
PKNOX1-202ENST00000418336 CRBNQ96SW2 442 aa25.22■■□□□ 1.63
PKNOX1-202ENST00000418336 COL2A1P02458 1487 aaPredicted RBP25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 SIPA1L1O43166 1804 aa25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 TESPA1A2RU30 521 aaPredicted RBP25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 TRPA1O75762 1119 aa25.21■■□□□ 1.63
PKNOX1-202ENST00000418336 LDHCP07864 332 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms