RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 CPA4Q9UI42 421 aa9.9□□□□□ -0.82
HLA-DPA1-241ENST00000417724 ZSWIM8A7E2V4 1837 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PDHXO00330 501 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ECM2O94769 699 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 GJB1P08034 283 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 GRK4P32298 578 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 BCAMP50895 628 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MTFR1Q15390 333 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MIGA2Q7L4E1 593 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 KAZALD1Q96I82 304 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 TRIM47Q96LD4 638 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SALL2Q9Y467 1007 aaPredicted RBP9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 NR2E3Q9Y5X4 410 aa9.89□□□□□ -0.83
HLA-DPA1-241ENST00000417724 RPAP1Q9BWH6 1393 aaPredicted RBP9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 UTYO14607 1347 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 IFIT1P09914 478 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 NBPF7P0C2Y1 421 aaPredicted RBP9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CCL5P13501 91 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 OSBPP22059 807 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 INPP5BP32019 993 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 GJA8P48165 433 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 UBXN2AP68543 259 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 WDR66Q8TBY9 1149 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 FAM151AQ8WW52 585 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SHISA4Q96DD7 197 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 RNF208Q9H0X6 261 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 BICC1Q9H694 974 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ZNF112Q9UJU3 913 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 KCNH4Q9UQ05 1017 aa9.88□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MYPNQ86TC9 1320 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CXCL11O14625 94 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CTGFP29279 349 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 FCGRTP55899 365 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 RABL6Q3YEC7 729 aaPredicted RBP9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 LRRC24Q50LG9 513 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 VGLL2Q8N8G2 317 aa9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PARK7Q99497 189 aaKnown RBP9.87□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CAPN2P17655 700 aa9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 TCP10Q12799 353 aa9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PUM3Q15397 648 aaKnown RBP9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 FASTKD5Q7L8L6 764 aaKnown RBP9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 UBE2Q1Q7Z7E8 422 aa9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MRS2Q9HD23 443 aa9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 BRCA2P51587 3418 aa9.86□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ADGRA2Q96PE1 1338 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MGAMO43451 1857 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SGPL1O95470 568 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 BCRP11274 1271 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SLC5A1P13866 664 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MOGSQ13724 837 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 NOL9Q5SY16 702 aaKnown RBP9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CDC42EP5Q6NZY7 148 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ANKRD44Q8N8A2 993 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SLAIN1Q8ND83 568 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 U2AF1L4Q8WU68 220 aaKnown RBP9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 MYH13Q9UKX3 1938 aa9.85□□□□□ -0.83
HLA-DPA1-241ENST00000417724 A0A1W2PPC1 479 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ADCY3O60266 1144 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 FARP2O94887 1054 aaPredicted RBP9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 CYP2C8P10632 490 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 FGFR2P21802 821 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PRKCZQ05513 592 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 GPAT2Q6NUI2 795 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 KLHDC4Q8TBB5 520 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 LPIN2Q92539 896 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PRO3102Q9H379 93 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 GNL3LQ9NVN8 582 aaKnown RBP9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 DAGLAQ9Y4D2 1042 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 ZHX2Q9Y6X8 837 aa9.84□□□□□ -0.83
HLA-DPA1-241ENST00000417724 EYA2O00167 538 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 ZBTB7BO15156 539 aaPredicted RBP9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 EVI5O60447 810 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 TFRCP02786 760 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 LDHBP07195 334 aaKnown RBP9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 FLT3LGP49771 235 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 NFIAQ12857 509 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DIXDC1Q155Q3 683 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SLC17A8Q8NDX2 589 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PXYLP1Q8TE99 480 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 FAM198AQ9UFP1 575 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 GABRQQ9UN88 632 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SLC45A1Q9Y2W3 748 aa9.83□□□□□ -0.84
HLA-DPA1-241ENST00000417724 A0A0G2JLL6 359 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PHF20L1A8MW92 1017 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DLL1O00548 723 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 IRF5Q13568 498 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 GADL1Q6ZQY3 521 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 PRRT2Q7Z6L0 340 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SCYL3Q8IZE3 742 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 SMCR8Q8TEV9 937 aaPredicted RBP9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 USP44Q9H0E7 712 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 AFG3L2Q9Y4W6 797 aa9.82□□□□□ -0.84
HLA-DPA1-241ENST00000417724 DOCK3Q8IZD9 2030 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms