RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 SPATA5Q8NB90 893 aa19.24■□□□□ 0.67
ITGB1-204ENST00000417122 HMG20BQ9P0W2 317 aa19.24■□□□□ 0.67
ITGB1-204ENST00000417122 CASP8AP2Q9UKL3 1982 aa19.23■□□□□ 0.67
ITGB1-204ENST00000417122 TM4SF4P48230 202 aa19.23■□□□□ 0.67
ITGB1-204ENST00000417122 CDC42EP5Q6NZY7 148 aa19.23■□□□□ 0.67
ITGB1-204ENST00000417122 UQCRFS1P1P0C7P4 283 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 SREBF2Q12772 1141 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 ERICH6Q7L0X2 663 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 SLF2Q8IX21 1173 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 WNK4Q96J92 1243 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 USP40Q9NVE5 1235 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 GAKO14976 1311 aa19.22■□□□□ 0.67
ITGB1-204ENST00000417122 RPAP1Q9BWH6 1393 aaPredicted RBP19.21■□□□□ 0.67
ITGB1-204ENST00000417122 ZBTB48P10074 688 aaPredicted RBP19.21■□□□□ 0.67
ITGB1-204ENST00000417122 MCAMP43121 646 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 CCDC158Q5M9N0 1113 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 TTC39AQ5SRH9 613 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 FAM151AQ8WW52 585 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 HOOK2Q96ED9 719 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 DBNDD2Q9BQY9 259 aa19.21■□□□□ 0.67
ITGB1-204ENST00000417122 AK9Q5TCS8 1911 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 LAMB1P07942 1786 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 MANSC4A6NHS7 340 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-204ENST00000417122 MECOMQ03112 1051 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 TCP10Q12799 353 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 NFIAQ12857 509 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 TBC1D9Q6ZT07 1266 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 RPAP2Q8IXW5 612 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-204ENST00000417122 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-204ENST00000417122 FAM163AQ96GL9 167 aaPredicted RBP19.2■□□□□ 0.66
ITGB1-204ENST00000417122 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
ITGB1-204ENST00000417122 ZBTB40Q9NUA8 1239 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 EXOC6BQ9Y2D4 811 aa19.2■□□□□ 0.66
ITGB1-204ENST00000417122 CAPN15O75808 1086 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 MAP3K9P80192 1104 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.19■□□□□ 0.66
ITGB1-204ENST00000417122 ERC1Q8IUD2 1116 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.19■□□□□ 0.66
ITGB1-204ENST00000417122 ELP3Q9H9T3 547 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 FAM198AQ9UFP1 575 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 MROH7-TTC4A0A0A0MT08 1334 aa19.19■□□□□ 0.66
ITGB1-204ENST00000417122 BTDP43251 543 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 INHBEP58166 350 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 VGLL4Q14135 290 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 PDE3AQ14432 1141 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 HSP90AB4PQ58FF6 505 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 C20orf194Q5TEA3 1177 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 DCAF15Q66K64 600 aa19.18■□□□□ 0.66
ITGB1-204ENST00000417122 EAF2Q96CJ1 260 aaPredicted RBP19.18■□□□□ 0.66
ITGB1-204ENST00000417122 CCDC8Q9H0W5 538 aaPredicted RBP19.18■□□□□ 0.66
ITGB1-204ENST00000417122 GJA5P36382 358 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 GSTO1P78417 241 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 ZNF384Q8TF68 577 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 NSUN4Q96CB9 384 aaKnown RBP19.17■□□□□ 0.66
ITGB1-204ENST00000417122 OPTNQ96CV9 577 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
ITGB1-204ENST00000417122 IDI2Q9BXS1 227 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 SNRKQ9NRH2 765 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 TLR7Q9NYK1 1049 aaKnown RBP19.17■□□□□ 0.66
ITGB1-204ENST00000417122 RAI14Q9P0K7 980 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 LRP2BPQ9P2M1 347 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 DBNLQ9UJU6 430 aaKnown RBP19.17■□□□□ 0.66
ITGB1-204ENST00000417122 CSADQ9Y600 493 aa19.17■□□□□ 0.66
ITGB1-204ENST00000417122 HMMRO75330 724 aa19.16■□□□□ 0.66
ITGB1-204ENST00000417122 TBC1D8O95759 1140 aa19.16■□□□□ 0.66
ITGB1-204ENST00000417122 LDHCP07864 332 aa19.16■□□□□ 0.66
ITGB1-204ENST00000417122 MIGA2Q7L4E1 593 aa19.16■□□□□ 0.66
ITGB1-204ENST00000417122 WRNIP1Q96S55 665 aa19.16■□□□□ 0.66
ITGB1-204ENST00000417122 GPR75-ASB3A0A0A6YYF3 556 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 ENTPD3O75355 529 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 ALDH1A1P00352 501 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 RGS3P49796 1198 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 IFNL1Q8IU54 200 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 ZFPM1Q8IX07 1006 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 SIRT2Q8IXJ6 389 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 RHPN1Q8TCX5 695 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 ZNF341Q9BYN7 854 aa19.15■□□□□ 0.66
ITGB1-204ENST00000417122 DOCK2Q92608 1830 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 AACSQ86V21 672 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 CNKSR2Q8WXI2 1034 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 ZKSCAN4Q969J2 545 aaPredicted RBP19.14■□□□□ 0.65
ITGB1-204ENST00000417122 SNCAIPQ9Y6H5 919 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 RFX7Q2KHR2 1363 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 MAST2Q6P0Q8 1798 aa19.14■□□□□ 0.65
ITGB1-204ENST00000417122 MYO5AQ9Y4I1 1855 aaKnown RBP19.14■□□□□ 0.65
ITGB1-204ENST00000417122 WDHD1O75717 1129 aaPredicted RBP19.13■□□□□ 0.65
ITGB1-204ENST00000417122 CYP2E1P05181 493 aaPredicted RBP19.13■□□□□ 0.65
ITGB1-204ENST00000417122 ZAP70P43403 619 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 PICALMQ13492 652 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 DGKZQ13574 1117 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 ABHD8Q96I13 439 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 CFHR5Q9BXR6 569 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 MCOLN1Q9GZU1 580 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 IL1RAPL2Q9NP60 686 aa19.13■□□□□ 0.65
ITGB1-204ENST00000417122 TESPA1A2RU30 521 aaPredicted RBP19.12■□□□□ 0.65
ITGB1-204ENST00000417122 SPDYE5A6NIY4 337 aa19.12■□□□□ 0.65
ITGB1-204ENST00000417122 IGF2BP3O00425 579 aaKnown RBP eCLIP19.12■□□□□ 0.65
ITGB1-204ENST00000417122 RHBDL3P58872 404 aa19.12■□□□□ 0.65
ITGB1-204ENST00000417122 KIF1BPQ96EK5 621 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms