RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CETPP11597 493 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 DCAF15Q66K64 600 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 CDC42EP5Q6NZY7 148 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 MIGA2Q7L4E1 593 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 ARMC5Q96C12 935 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 ZNF341Q9BYN7 854 aa18.47■□□□□ 0.55
RPS28-201ENST00000417088 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
RPS28-201ENST00000417088 LRRFIP2Q9Y608 721 aaKnown RBP18.47■□□□□ 0.55
RPS28-201ENST00000417088 KIAA0100Q14667 2235 aaKnown RBP18.47■□□□□ 0.55
RPS28-201ENST00000417088 BTBD19C9JJ37 291 aa18.46■□□□□ 0.55
RPS28-201ENST00000417088 INPP5BP32019 993 aa18.46■□□□□ 0.55
RPS28-201ENST00000417088 IL15P40933 162 aaPredicted RBP18.46■□□□□ 0.55
RPS28-201ENST00000417088 PHKA1P46020 1223 aa18.46■□□□□ 0.55
RPS28-201ENST00000417088 PPIL2Q13356 520 aa18.46■□□□□ 0.55
RPS28-201ENST00000417088 SNAPC2Q13487 334 aa18.46■□□□□ 0.55
RPS28-201ENST00000417088 GNL3LQ9NVN8 582 aaKnown RBP18.46■□□□□ 0.55
RPS28-201ENST00000417088 CENPFP49454 3210 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 LDHBP07195 334 aaKnown RBP18.45■□□□□ 0.54
RPS28-201ENST00000417088 TCP10Q12799 353 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 NFIAQ12857 509 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 MEIS3Q99687 375 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 ZCCHC17Q9NP64 241 aaKnown RBP18.45■□□□□ 0.54
RPS28-201ENST00000417088 ZNF112Q9UJU3 913 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 HDAC5Q9UQL6 1122 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 SALL1Q9NSC2 1324 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 MYH13Q9UKX3 1938 aa18.45■□□□□ 0.54
RPS28-201ENST00000417088 SEMA3EO15041 775 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 TLR2O60603 784 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
RPS28-201ENST00000417088 PPATQ06203 517 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 ARHGEF6Q15052 776 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 COPRSQ9NQ92 184 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 FAM198AQ9UFP1 575 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 DENND2AQ9ULE3 1009 aa18.44■□□□□ 0.54
RPS28-201ENST00000417088 ZBTB22O15209 634 aa18.43■□□□□ 0.54
RPS28-201ENST00000417088 WDHD1O75717 1129 aaPredicted RBP18.43■□□□□ 0.54
RPS28-201ENST00000417088 ADORA1P30542 326 aa18.43■□□□□ 0.54
RPS28-201ENST00000417088 CCDC102BQ68D86 513 aa18.43■□□□□ 0.54
RPS28-201ENST00000417088 USP40Q9NVE5 1235 aa18.43■□□□□ 0.54
RPS28-201ENST00000417088 PTCH2Q9Y6C5 1203 aa18.43■□□□□ 0.54
RPS28-201ENST00000417088 ZNF333Q96JL9 665 aa18.42■□□□□ 0.54
RPS28-201ENST00000417088 MKI67P46013 3256 aaKnown RBP18.42■□□□□ 0.54
RPS28-201ENST00000417088 EN2P19622 333 aaPredicted RBP18.41■□□□□ 0.54
RPS28-201ENST00000417088 TIMM10P62072 90 aa18.41■□□□□ 0.54
RPS28-201ENST00000417088 LACTBP83111 547 aaPredicted RBP18.41■□□□□ 0.54
RPS28-201ENST00000417088 ZFPM1Q8IX07 1006 aa18.41■□□□□ 0.54
RPS28-201ENST00000417088 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
RPS28-201ENST00000417088 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
RPS28-201ENST00000417088 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
RPS28-201ENST00000417088 KCNH4Q9UQ05 1017 aa18.41■□□□□ 0.54
RPS28-201ENST00000417088 RASGRF1Q13972 1273 aa18.4■□□□□ 0.54
RPS28-201ENST00000417088 NOL9Q5SY16 702 aaKnown RBP18.4■□□□□ 0.54
RPS28-201ENST00000417088 BRCA2P51587 3418 aa18.39■□□□□ 0.54
RPS28-201ENST00000417088 CCER2I3L3R5 266 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 MOGSQ13724 837 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 SLC9C1Q4G0N8 1177 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 C17orf99Q6UX52 265 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 ANKRD23Q86SG2 305 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
RPS28-201ENST00000417088 TMEM106CQ9BVX2 250 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 IDI2Q9BXS1 227 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 GAKO14976 1311 aa18.39■□□□□ 0.53
RPS28-201ENST00000417088 RBBP6Q7Z6E9 1792 aaKnown RBP18.38■□□□□ 0.53
RPS28-201ENST00000417088 PDHXO00330 501 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 SRGAP3O43295 1099 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 GNAI3P08754 354 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 RGS3P49796 1198 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 TFCP2Q12800 502 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 MTX1Q13505 466 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 KIF22Q14807 665 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 NBPF11Q86T75 865 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 ABCF2Q9UG63 623 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 CPA4Q9UI42 421 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 AK9Q5TCS8 1911 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 PDS5AQ29RF7 1337 aaKnown RBP18.38■□□□□ 0.53
RPS28-201ENST00000417088 ATRNL1Q5VV63 1379 aa18.38■□□□□ 0.53
RPS28-201ENST00000417088 A0A1B0GUL7 405 aa18.37■□□□□ 0.53
RPS28-201ENST00000417088 PHF20L1A8MW92 1017 aa18.37■□□□□ 0.53
RPS28-201ENST00000417088 ENTPD3O75355 529 aa18.37■□□□□ 0.53
RPS28-201ENST00000417088 SH3BP5LQ7L8J4 393 aa18.37■□□□□ 0.53
RPS28-201ENST00000417088 FAM163AQ96GL9 167 aaPredicted RBP18.37■□□□□ 0.53
RPS28-201ENST00000417088 XAGE2Q96GT9 111 aa18.37■□□□□ 0.53
RPS28-201ENST00000417088 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.37■□□□□ 0.53
RPS28-201ENST00000417088 ZSWIM8A7E2V4 1837 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 GNRH1P01148 92 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 CTGFP29279 349 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 DZIP1Q86YF9 867 aaKnown RBP18.36■□□□□ 0.53
RPS28-201ENST00000417088 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 AKAP2Q9Y2D5 859 aa18.36■□□□□ 0.53
RPS28-201ENST00000417088 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
RPS28-201ENST00000417088 CXCL11O14625 94 aa18.35■□□□□ 0.53
RPS28-201ENST00000417088 ECM2O94769 699 aaPredicted RBP18.35■□□□□ 0.53
RPS28-201ENST00000417088 PRMT2P55345 433 aa18.35■□□□□ 0.53
RPS28-201ENST00000417088 MVPQ14764 893 aaKnown RBP18.35■□□□□ 0.53
RPS28-201ENST00000417088 SPTY2D1Q68D10 685 aaPredicted RBP18.35■□□□□ 0.53
RPS28-201ENST00000417088 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
RPS28-201ENST00000417088 DDX4Q9NQI0 724 aaKnown RBP18.35■□□□□ 0.53
RPS28-201ENST00000417088 TNNQ9UQP3 1299 aa18.35■□□□□ 0.53
RPS28-201ENST00000417088 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms