RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 COL11A2P13942 1736 aaPredicted RBP8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 ATP9BO43861 1147 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 DIAPH1O60610 1272 aaKnown RBP8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 CYP19A1P11511 503 aaPredicted RBP8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 MTHFSDQ2M296 383 aaKnown RBP8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 TTC5Q8N0Z6 440 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 COL25A1Q9BXS0 654 aaPredicted RBP8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 ZBTB1Q9Y2K1 713 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 PCDHGA11Q9Y5H2 935 aa8.88□□□□□ -0.99
THUMPD3-202ENST00000416603 KDM2BQ8NHM5 1336 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 BCORQ6W2J9 1755 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 TMEM229AB2RXF0 380 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 U2SURPO15042 1029 aaKnown RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 CANXP27824 592 aaKnown RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 TM4SF1P30408 202 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 MFAP1P55081 439 aaKnown RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 KRT76Q01546 638 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 RASSF7Q02833 373 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 C4orf17Q53FE4 359 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 RHBDD1Q8TEB9 315 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 ZNF837Q96EG3 531 aaPredicted RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 CNTNAP3Q9BZ76 1288 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 NARFQ9UHQ1 456 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 COL3A1P02461 1466 aaPredicted RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 DICER1Q9UPY3 1922 aaKnown RBP8.87□□□□□ -0.99
THUMPD3-202ENST00000416603 SERPINB2P05120 415 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 TEFQ10587 303 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 NFIXQ14938 502 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 BICDL1Q6ZP65 573 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 TRIM22Q8IYM9 498 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 CALR3Q96L12 384 aaKnown RBP8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 CARMIL3Q8ND23 1372 aa8.86□□□□□ -0.99
THUMPD3-202ENST00000416603 H7C1W4 665 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 STARD3NLO95772 234 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 SMTNP53814 917 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 TRIM50Q86XT4 487 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 GMCL1Q96IK5 515 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 RRAGCQ9HB90 399 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 GPAMQ9HCL2 828 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 STK17AQ9UEE5 414 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 ARFGEF2Q9Y6D5 1785 aa8.85□□□□□ -0.99
THUMPD3-202ENST00000416603 A0A1B0GTH6 734 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 F11P03951 625 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 FER1L6Q2WGJ9 1857 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 RNFT1Q5M7Z0 435 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 C2CD5Q86YS7 1000 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 GAS2L2Q8NHY3 880 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 HEG1Q9ULI3 1381 aa8.84□□□□□ -0.99
THUMPD3-202ENST00000416603 A0A087WZG4 1122 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 H0YIN7 160 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 NPHP1O15259 732 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 ATP1A2P50993 1020 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 HTRA3P83110 453 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 DBN1Q16643 649 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 TTLL6Q8N841 843 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.83□□□□□ -1
THUMPD3-202ENST00000416603 ZNF496Q96IT1 587 aaPredicted RBP8.83□□□□□ -1
THUMPD3-202ENST00000416603 LAMB4A4D0S4 1761 aa8.83□□□□□ -1
THUMPD3-202ENST00000416603 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 A6NJY4 79 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 GPR25O00155 361 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 BACH1O14867 736 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 HSP90B1P14625 803 aaKnown RBP8.82□□□□□ -1
THUMPD3-202ENST00000416603 LMNB1P20700 586 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 RBM25P49756 843 aaKnown RBP8.82□□□□□ -1
THUMPD3-202ENST00000416603 EIF5P55010 431 aaKnown RBP8.82□□□□□ -1
THUMPD3-202ENST00000416603 FSTL1Q12841 308 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 TBC1D9BQ66K14 1250 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 ZNF790Q6PG37 636 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 ZNF622Q969S3 477 aaKnown RBP eCLIP8.82□□□□□ -15e-7■□□□□ 8.2
THUMPD3-202ENST00000416603 CFAP53Q96M91 514 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 NUCKS1Q9H1E3 243 aaKnown RBP8.82□□□□□ -1
THUMPD3-202ENST00000416603 ZNF358Q9NW07 568 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 NPC1L1Q9UHC9 1359 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 SLX4Q8IY92 1834 aa8.82□□□□□ -1
THUMPD3-202ENST00000416603 FAM181BA6NEQ2 426 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 PRKAR2BP31323 418 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 MTFR1Q15390 333 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 SMC1BQ8NDV3 1235 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 IL17REQ8NFR9 667 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 FMNL2Q96PY5 1086 aa8.81□□□□□ -1
THUMPD3-202ENST00000416603 TEX13AQ9BXU3 409 aaPredicted RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 NIFKQ9BYG3 293 aaKnown RBP8.81□□□□□ -1
THUMPD3-202ENST00000416603 GZF1Q9H116 711 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms