RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 KLHDC4Q8TBB5 520 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 CD99L2Q8TCZ2 262 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 FAM151AQ8WW52 585 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 BRI3BPQ8WY22 251 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 ARMC5Q96C12 935 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 PTPN18Q99952 460 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 DENND2AQ9ULE3 1009 aa16.63■□□□□ 0.25
LINC01398-201ENST00000416581 PRMT2P55345 433 aa16.62■□□□□ 0.25
LINC01398-201ENST00000416581 PPATQ06203 517 aa16.62■□□□□ 0.25
LINC01398-201ENST00000416581 ATP2B3Q16720 1220 aa16.62■□□□□ 0.25
LINC01398-201ENST00000416581 MIER1Q8N108 512 aa16.62■□□□□ 0.25
LINC01398-201ENST00000416581 LDHBP07195 334 aaKnown RBP16.61■□□□□ 0.25
LINC01398-201ENST00000416581 GRIK5Q16478 980 aa16.61■□□□□ 0.25
LINC01398-201ENST00000416581 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
LINC01398-201ENST00000416581 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
LINC01398-201ENST00000416581 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
LINC01398-201ENST00000416581 TLR2O60603 784 aa16.6■□□□□ 0.25
LINC01398-201ENST00000416581 CDAN1Q8IWY9 1227 aa16.6■□□□□ 0.25
LINC01398-201ENST00000416581 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
LINC01398-201ENST00000416581 ARHGAP45Q92619 1136 aa16.6■□□□□ 0.25
LINC01398-201ENST00000416581 AK9Q5TCS8 1911 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 GNAI3P08754 354 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 CACNB3P54284 484 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 COPRSQ9NQ92 184 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 AKAP2Q9Y2D5 859 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
LINC01398-201ENST00000416581 SLC9C1Q4G0N8 1177 aa16.58■□□□□ 0.24
LINC01398-201ENST00000416581 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
LINC01398-201ENST00000416581 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.24
LINC01398-201ENST00000416581 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.24
LINC01398-201ENST00000416581 DOCK2Q92608 1830 aa16.58■□□□□ 0.24
LINC01398-201ENST00000416581 IRF6O14896 467 aa16.57■□□□□ 0.24
LINC01398-201ENST00000416581 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
LINC01398-201ENST00000416581 SIL1Q9H173 461 aa16.57■□□□□ 0.24
LINC01398-201ENST00000416581 ZNF112Q9UJU3 913 aa16.57■□□□□ 0.24
LINC01398-201ENST00000416581 NOB1Q9ULX3 412 aaKnown RBP16.57■□□□□ 0.24
LINC01398-201ENST00000416581 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 ENTPD3O75355 529 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 HOXD10P28358 340 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 PRDX5P30044 214 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 LACTBP83111 547 aaPredicted RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 MVPQ14764 893 aaKnown RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 CDC42EP5Q6NZY7 148 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 ANKRD23Q86SG2 305 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 ZKSCAN4Q969J2 545 aaPredicted RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 ZNF333Q96JL9 665 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 KCNH4Q9UQ05 1017 aa16.56■□□□□ 0.24
LINC01398-201ENST00000416581 LRRFIP2Q9Y608 721 aaKnown RBP16.56■□□□□ 0.24
LINC01398-201ENST00000416581 KIAA0100Q14667 2235 aaKnown RBP16.55■□□□□ 0.24
LINC01398-201ENST00000416581 MYH2Q9UKX2 1941 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 GAKO14976 1311 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 BTBD19C9JJ37 291 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 MAP4K4O95819 1239 aaPredicted RBP16.55■□□□□ 0.24
LINC01398-201ENST00000416581 MTX1Q13505 466 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 IDI2Q9BXS1 227 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 USP40Q9NVE5 1235 aa16.55■□□□□ 0.24
LINC01398-201ENST00000416581 CXCL11O14625 94 aa16.54■□□□□ 0.24
LINC01398-201ENST00000416581 DIXDC1Q155Q3 683 aa16.54■□□□□ 0.24
LINC01398-201ENST00000416581 CCDC102BQ68D86 513 aa16.54■□□□□ 0.24
LINC01398-201ENST00000416581 PARK7Q99497 189 aaKnown RBP16.54■□□□□ 0.24
LINC01398-201ENST00000416581 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
LINC01398-201ENST00000416581 POTEFA5A3E0 1075 aa16.53■□□□□ 0.24
LINC01398-201ENST00000416581 PHKA1P46020 1223 aa16.53■□□□□ 0.24
LINC01398-201ENST00000416581 TCP10Q12799 353 aa16.53■□□□□ 0.24
LINC01398-201ENST00000416581 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
LINC01398-201ENST00000416581 FAM163AQ96GL9 167 aaPredicted RBP16.53■□□□□ 0.24
LINC01398-201ENST00000416581 PTCH2Q9Y6C5 1203 aa16.53■□□□□ 0.24
LINC01398-201ENST00000416581 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
LINC01398-201ENST00000416581 INPP5BP32019 993 aa16.52■□□□□ 0.24
LINC01398-201ENST00000416581 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
LINC01398-201ENST00000416581 GSTO1P78417 241 aa16.52■□□□□ 0.24
LINC01398-201ENST00000416581 SLC4A8Q2Y0W8 1093 aa16.52■□□□□ 0.24
LINC01398-201ENST00000416581 FASTKD5Q7L8L6 764 aaKnown RBP16.52■□□□□ 0.24
LINC01398-201ENST00000416581 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
LINC01398-201ENST00000416581 MEIS3Q99687 375 aa16.52■□□□□ 0.24
LINC01398-201ENST00000416581 A0A1B0GUL7 405 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 PDHXO00330 501 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 IGSF3O75054 1194 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
LINC01398-201ENST00000416581 LDHCP07864 332 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 CAPN2P17655 700 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 NFIAQ12857 509 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 C17orf99Q6UX52 265 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
LINC01398-201ENST00000416581 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
LINC01398-201ENST00000416581 DOCK1Q14185 1865 aa16.5■□□□□ 0.23
LINC01398-201ENST00000416581 MROH7-TTC4A0A0A0MT08 1334 aa16.5■□□□□ 0.23
LINC01398-201ENST00000416581 COL2A1P02458 1487 aaPredicted RBP16.5■□□□□ 0.23
LINC01398-201ENST00000416581 RGS3P49796 1198 aa16.5■□□□□ 0.23
LINC01398-201ENST00000416581 RASGRF1Q13972 1273 aa16.5■□□□□ 0.23
LINC01398-201ENST00000416581 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
LINC01398-201ENST00000416581 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms