RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 XAGE2Q96GT9 111 aa21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 OTOFQ9HC10 1997 aa21.77■■□□□ 1.08
PDLIM2-208ENST00000416159 RPAP1Q9BWH6 1393 aaPredicted RBP21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 G3BP1Q13283 466 aaKnown RBP eCLIP21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 VGLL4Q14135 290 aa21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 MVPQ14764 893 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 DCAF15Q66K64 600 aa21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 CDC42EP5Q6NZY7 148 aa21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 FAM151AQ8WW52 585 aa21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 PDS5AQ29RF7 1337 aaKnown RBP21.76■■□□□ 1.07
PDLIM2-208ENST00000416159 NEUROD6Q96NK8 337 aa21.75■■□□□ 1.07
PDLIM2-208ENST00000416159 PNMA6EA0A0J9YXQ4 647 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 GTF2A2P52657 109 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 MLLT1Q03111 559 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 RASGRF1Q13972 1273 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 SPTY2D1Q68D10 685 aaPredicted RBP21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 SLF2Q8IX21 1173 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 MS4A4AQ96JQ5 239 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 ZNF341Q9BYN7 854 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 USP40Q9NVE5 1235 aa21.74■■□□□ 1.07
PDLIM2-208ENST00000416159 WRNIP1Q96S55 665 aa21.73■■□□□ 1.07
PDLIM2-208ENST00000416159 PTPN18Q99952 460 aa21.73■■□□□ 1.07
PDLIM2-208ENST00000416159 ABCF2Q9UG63 623 aa21.73■■□□□ 1.07
PDLIM2-208ENST00000416159 SPDYE5A6NIY4 337 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 TCP10Q12799 353 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 GORABQ5T7V8 394 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 ERO1BQ86YB8 467 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 DZIP1Q86YF9 867 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 FTSJ3Q8IY81 847 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 CNKSR2Q8WXI2 1034 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 OTUD5Q96G74 571 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 HPS5Q9UPZ3 1129 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 SNCAIPQ9Y6H5 919 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 ZBED9Q6R2W3 1325 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 AK9Q5TCS8 1911 aa21.72■■□□□ 1.07
PDLIM2-208ENST00000416159 ATP8B2P98198 1209 aa21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 CRHR2Q13324 411 aa21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 FBXO46Q6PJ61 603 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 MIGA2Q7L4E1 593 aa21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 BRI3BPQ8WY22 251 aa21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 FAM163AQ96GL9 167 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 GAKO14976 1311 aa21.71■■□□□ 1.07
PDLIM2-208ENST00000416159 MYH2Q9UKX2 1941 aa21.7■■□□□ 1.07
PDLIM2-208ENST00000416159 CCL15-CCL14A0A0B4J2E2 113 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 NFIAQ12857 509 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 POLA2Q14181 598 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 CCL15Q16663 113 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 ERICH6Q7L0X2 663 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 ZKSCAN4Q969J2 545 aaPredicted RBP21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 FAM198AQ9UFP1 575 aa21.7■■□□□ 1.06
PDLIM2-208ENST00000416159 SSH3Q8TE77 659 aa21.69■■□□□ 1.06
PDLIM2-208ENST00000416159 ERO1AQ96HE7 468 aa21.69■■□□□ 1.06
PDLIM2-208ENST00000416159 IDI2Q9BXS1 227 aa21.69■■□□□ 1.06
PDLIM2-208ENST00000416159 ZNF112Q9UJU3 913 aa21.69■■□□□ 1.06
PDLIM2-208ENST00000416159 ENTPD3O75355 529 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 CETPP11597 493 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 PPIL2Q13356 520 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 ITPRIPQ8IWB1 547 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 ZFYVE28Q9HCC9 887 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 GPR108Q9NPR9 543 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 HMG20BQ9P0W2 317 aa21.68■■□□□ 1.06
PDLIM2-208ENST00000416159 ZBTB7BO15156 539 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 UQCRFS1P1P0C7P4 283 aa21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 ARID4AP29374 1257 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 PPATQ06203 517 aa21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 SNAPC2Q13487 334 aa21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 TAF1CQ15572 869 aaPredicted RBP21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 SPATA5Q8NB90 893 aa21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 TRIM17Q9Y577 477 aa21.67■■□□□ 1.06
PDLIM2-208ENST00000416159 IRF6O14896 467 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 WDHD1O75717 1129 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 LDHCP07864 332 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 INPP5BP32019 993 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 RGS3P49796 1198 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 SOX10P56693 466 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 SP3Q02447 781 aa21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 OS9Q13438 667 aaPredicted RBP21.66■■□□□ 1.06
PDLIM2-208ENST00000416159 MROH7-TTC4A0A0A0MT08 1334 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 SURF6O75683 361 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 RLBP1P12271 317 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 BTDP43251 543 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 GSTO1P78417 241 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 MECOMQ03112 1051 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 OTOP1Q7RTM1 612 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 ZFPM1Q8IX07 1006 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 FAM43AQ8N2R8 423 aa21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 ZCCHC17Q9NP64 241 aaKnown RBP21.65■■□□□ 1.06
PDLIM2-208ENST00000416159 GPR75-ASB3A0A0A6YYF3 556 aa21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 TNNI3KQ59H18 835 aa21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 NOL9Q5SY16 702 aaKnown RBP21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 CD99L2Q8TCZ2 262 aa21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 NOP58Q9Y2X3 529 aaKnown RBP21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 FPGT-TNNI3KV9GXZ4 949 aa21.64■■□□□ 1.05
PDLIM2-208ENST00000416159 MAP4K4O95819 1239 aaPredicted RBP21.63■■□□□ 1.05
PDLIM2-208ENST00000416159 CCDC158Q5M9N0 1113 aa21.63■■□□□ 1.05
PDLIM2-208ENST00000416159 ZSCAN29Q8IWY8 852 aaPredicted RBP21.63■■□□□ 1.05
PDLIM2-208ENST00000416159 NSUN4Q96CB9 384 aaKnown RBP21.63■■□□□ 1.05
PDLIM2-208ENST00000416159 BTBD19C9JJ37 291 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms