RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 RPAP1Q9BWH6 1393 aaPredicted RBP16.6■□□□□ 0.25
CTHRC1-202ENST00000415886 INPP5BP32019 993 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 PRMT2P55345 433 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 RABL6Q3YEC7 729 aaPredicted RBP16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 C17orf99Q6UX52 265 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 CHRDL2Q6WN34 429 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 ANKRD44Q8N8A2 993 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 HOOK2Q96ED9 719 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 TRIM47Q96LD4 638 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 UTYO14607 1347 aa16.59■□□□□ 0.25
CTHRC1-202ENST00000415886 PDE8BO95263 885 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 PSMC4P43686 418 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 PPATQ06203 517 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 MIER1Q8N108 512 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 CDCA7LQ96GN5 454 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 SRRDQ9UH36 339 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 MAST3O60307 1309 aa16.58■□□□□ 0.24
CTHRC1-202ENST00000415886 ADGRA2Q96PE1 1338 aa16.57■□□□□ 0.24
CTHRC1-202ENST00000415886 PDHXO00330 501 aa16.57■□□□□ 0.24
CTHRC1-202ENST00000415886 OSBPP22059 807 aa16.57■□□□□ 0.24
CTHRC1-202ENST00000415886 ANKRD23Q86SG2 305 aa16.57■□□□□ 0.24
CTHRC1-202ENST00000415886 GRK4P32298 578 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 TCP10Q12799 353 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 RAET1EQ8TD07 263 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 DPF3Q92784 378 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 SUGT1Q9Y2Z0 365 aa16.56■□□□□ 0.24
CTHRC1-202ENST00000415886 MYPNQ86TC9 1320 aa16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 FMNL1O95466 1100 aaPredicted RBP16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 MOGSQ13724 837 aa16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 MRPL50Q8N5N7 158 aaKnown RBP16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 FAM151AQ8WW52 585 aa16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 KCNH4Q9UQ05 1017 aa16.55■□□□□ 0.24
CTHRC1-202ENST00000415886 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 CCL5P13501 91 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 FGFR2P21802 821 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 HOXD10P28358 340 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 MYH13Q9UKX3 1938 aa16.54■□□□□ 0.24
CTHRC1-202ENST00000415886 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 GJA8P48165 433 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 NFIAQ12857 509 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 DIXDC1Q155Q3 683 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 ALDH1L2Q3SY69 923 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 CDC42EP5Q6NZY7 148 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 UBE2Q1Q7Z7E8 422 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 DAGLAQ9Y4D2 1042 aa16.53■□□□□ 0.24
CTHRC1-202ENST00000415886 PTPRCP08575 1304 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 GJB1P08034 283 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 CYP2C8P10632 490 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 PRKCZQ05513 592 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 NOL9Q5SY16 702 aaKnown RBP16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 BIN2Q9UBW5 565 aaPredicted RBP16.52■□□□□ 0.24
CTHRC1-202ENST00000415886 BCRP11274 1271 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 SLC5A1P13866 664 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 PRDX5P30044 214 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 HTATIP2Q9BUP3 242 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 GABRQQ9UN88 632 aa16.51■□□□□ 0.23
CTHRC1-202ENST00000415886 FCGRTP55899 365 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 UBXN2AP68543 259 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 LPIN2Q92539 896 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 MGAMO43451 1857 aa16.5■□□□□ 0.23
CTHRC1-202ENST00000415886 EYA2O00167 538 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 U2AF1L4Q8WU68 220 aaKnown RBP16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 USP40Q9NVE5 1235 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 DOCK2Q92608 1830 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 ATRNL1Q5VV63 1379 aa16.49■□□□□ 0.23
CTHRC1-202ENST00000415886 CXCL11O14625 94 aa16.48■□□□□ 0.23
CTHRC1-202ENST00000415886 FARP2O94887 1054 aaPredicted RBP16.48■□□□□ 0.23
CTHRC1-202ENST00000415886 SLAIN1Q8ND83 568 aa16.48■□□□□ 0.23
CTHRC1-202ENST00000415886 TRIOBPQ9H2D6 2365 aa16.47■□□□□ 0.23
CTHRC1-202ENST00000415886 LDHBP07195 334 aaKnown RBP16.47■□□□□ 0.23
CTHRC1-202ENST00000415886 ATG9AQ7Z3C6 839 aa16.47■□□□□ 0.23
CTHRC1-202ENST00000415886 NOB1Q9ULX3 412 aaKnown RBP16.47■□□□□ 0.23
CTHRC1-202ENST00000415886 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
CTHRC1-202ENST00000415886 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms