RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 FAM35AQ86V20 835 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
EPHA4-204ENST00000415749 LRRC4BQ9NT99 713 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 TET3O43151 1660 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.02
EPHA4-204ENST00000415749 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 COL16A1Q07092 1604 aaPredicted RBP8.7□□□□□ -1.02
EPHA4-204ENST00000415749 ZBTB42B2RXF5 422 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 GNA15P30679 374 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 C9orf131Q5VYM1 1079 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 MICALL1Q8N3F8 863 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 ACDQ96AP0 544 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 MRS2Q9HD23 443 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 PARP2Q9UGN5 583 aa8.7□□□□□ -1.02
EPHA4-204ENST00000415749 NKTRP30414 1462 aaKnown RBP8.7□□□□□ -1.02
EPHA4-204ENST00000415749 BCRP11274 1271 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 EPXP11678 715 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 CPB1P15086 417 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 PSMD2Q13200 908 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
EPHA4-204ENST00000415749 COL13A1Q5TAT6 717 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-204ENST00000415749 KIAA0319Q5VV43 1072 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 HFE2Q6ZVN8 426 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 BRINP3Q76B58 766 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 CEP120Q8N960 986 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 EPS8L3Q8TE67 593 aaKnown RBP8.69□□□□□ -1.02
EPHA4-204ENST00000415749 LRRC59Q96AG4 307 aaKnown RBP8.69□□□□□ -1.02
EPHA4-204ENST00000415749 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 MDFIQ99750 246 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 FRRS1LQ9P0K9 344 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 NCOA3Q9Y6Q9 1424 aa8.69□□□□□ -1.02
EPHA4-204ENST00000415749 J3QW42 95 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 SCAMP3O14828 347 aaKnown RBP8.68□□□□□ -1.02
EPHA4-204ENST00000415749 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
EPHA4-204ENST00000415749 HDLBPQ00341 1268 aaKnown RBP8.68□□□□□ -1.02
EPHA4-204ENST00000415749 MAP3K10Q02779 954 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 KANK3Q6NY19 840 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 TMC4Q7Z404 712 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 OSMRQ99650 979 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 EHD4Q9H223 541 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 SUV39H2Q9H5I1 410 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 SLC52A1Q9NWF4 448 aa8.68□□□□□ -1.02
EPHA4-204ENST00000415749 A0A1W2PP55 124 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 PIK3C2BO00750 1634 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 RGS12O14924 1447 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 OIP5O43482 229 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 DAB2P98082 770 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 EFCAB6Q5THR3 1501 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 GALNT6Q8NCL4 622 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 RRP7BPQ9NSQ0 103 aa8.67□□□□□ -1.02
EPHA4-204ENST00000415749 CEP152O94986 1710 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 ARHGEF5Q12774 1597 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 EHBP1L1Q8N3D4 1523 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 SORBS3O60504 671 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 IRS1P35568 1242 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
EPHA4-204ENST00000415749 LCE2CQ5TA81 110 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-204ENST00000415749 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 PLD4Q96BZ4 506 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 ZKSCAN3Q9BRR0 538 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 PBX4Q9BYU1 374 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 LATS2Q9NRM7 1088 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
EPHA4-204ENST00000415749 KANK1Q14678 1352 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 FAM177BA6PVY3 158 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-204ENST00000415749 AMPD1P23109 780 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 EIF4BP23588 611 aaKnown RBP8.65□□□□□ -1.02
EPHA4-204ENST00000415749 PERM1Q5SV97 790 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 CACTIN-AS1Q8N1I8 211 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 TMEM102Q8N9M5 508 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-204ENST00000415749 TTC9Q92623 222 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 BCO2Q9BYV7 579 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 SMG9Q9H0W8 520 aaKnown RBP8.65□□□□□ -1.02
EPHA4-204ENST00000415749 RASSF4Q9H2L5 321 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 NAGPAQ9UK23 515 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 AK5Q9Y6K8 562 aa8.65□□□□□ -1.02
EPHA4-204ENST00000415749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-204ENST00000415749 SHPRHQ149N8 1683 aa8.65□□□□□ -1.03
EPHA4-204ENST00000415749 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.03
EPHA4-204ENST00000415749 MROH1Q8NDA8 1641 aa8.65□□□□□ -1.03
EPHA4-204ENST00000415749 NWD1Q149M9 1564 aa8.65□□□□□ -1.03
EPHA4-204ENST00000415749 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.03
EPHA4-204ENST00000415749 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-204ENST00000415749 CELA2BP08218 269 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-204ENST00000415749 CEP135Q66GS9 1140 aa8.64□□□□□ -1.03
EPHA4-204ENST00000415749 PI16Q6UXB8 463 aa8.64□□□□□ -1.03
EPHA4-204ENST00000415749 LPIN3Q9BQK8 851 aa8.64□□□□□ -1.03
EPHA4-204ENST00000415749 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
EPHA4-204ENST00000415749 VTI1BQ9UEU0 232 aa8.64□□□□□ -1.03
EPHA4-204ENST00000415749 USP21Q9UK80 565 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms