RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ZNF296Q8WUU4 475 aaPredicted RBP30.84■■■□□ 2.53
HLA-C-204ENST00000415537 OPTNQ96CV9 577 aa30.84■■■□□ 2.53
HLA-C-204ENST00000415537 ATP8B2P98198 1209 aa30.83■■■□□ 2.53
HLA-C-204ENST00000415537 SPTY2D1Q68D10 685 aaPredicted RBP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 OTUD7BQ6GQQ9 843 aa30.83■■■□□ 2.53
HLA-C-204ENST00000415537 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 CTU1Q7Z7A3 348 aaKnown RBP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 DZIP1Q86YF9 867 aaKnown RBP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 CFHR5Q9BXR6 569 aa30.83■■■□□ 2.53
HLA-C-204ENST00000415537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.83■■■□□ 2.53
HLA-C-204ENST00000415537 GPR25O00155 361 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 RLBP1P12271 317 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 GJA5P36382 358 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 NOM1Q5C9Z4 860 aaKnown RBP30.82■■■□□ 2.52
HLA-C-204ENST00000415537 DCAF15Q66K64 600 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 SLF2Q8IX21 1173 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 FAM151AQ8WW52 585 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 C1orf115Q9H7X2 142 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 USP40Q9NVE5 1235 aa30.82■■■□□ 2.52
HLA-C-204ENST00000415537 RPAP1Q9BWH6 1393 aaPredicted RBP30.81■■■□□ 2.52
HLA-C-204ENST00000415537 OS9Q13438 667 aaPredicted RBP30.81■■■□□ 2.52
HLA-C-204ENST00000415537 VGLL4Q14135 290 aa30.81■■■□□ 2.52
HLA-C-204ENST00000415537 ZBTB7BO15156 539 aaPredicted RBP30.8■■■□□ 2.52
HLA-C-204ENST00000415537 TCP10Q12799 353 aa30.8■■■□□ 2.52
HLA-C-204ENST00000415537 POLA2Q14181 598 aa30.8■■■□□ 2.52
HLA-C-204ENST00000415537 SSH3Q8TE77 659 aa30.8■■■□□ 2.52
HLA-C-204ENST00000415537 ERICH6Q7L0X2 663 aa30.79■■■□□ 2.52
HLA-C-204ENST00000415537 WRNIP1Q96S55 665 aa30.79■■■□□ 2.52
HLA-C-204ENST00000415537 IGF2BP3O00425 579 aaKnown RBP eCLIP30.78■■■□□ 2.52
HLA-C-204ENST00000415537 FKTNO75072 461 aa30.77■■■□□ 2.52
HLA-C-204ENST00000415537 SURF6O75683 361 aaKnown RBP30.77■■■□□ 2.52
HLA-C-204ENST00000415537 MIGA2Q7L4E1 593 aa30.77■■■□□ 2.52
HLA-C-204ENST00000415537 ZNF341Q9BYN7 854 aa30.77■■■□□ 2.52
HLA-C-204ENST00000415537 R3HDMLQ9H3Y0 253 aa30.77■■■□□ 2.52
HLA-C-204ENST00000415537 NFIAQ12857 509 aa30.76■■■□□ 2.51
HLA-C-204ENST00000415537 SPATA5Q8NB90 893 aa30.76■■■□□ 2.51
HLA-C-204ENST00000415537 CNKSR2Q8WXI2 1034 aa30.76■■■□□ 2.51
HLA-C-204ENST00000415537 OTUD5Q96G74 571 aa30.76■■■□□ 2.51
HLA-C-204ENST00000415537 HMG20BQ9P0W2 317 aa30.76■■■□□ 2.51
HLA-C-204ENST00000415537 GAKO14976 1311 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 TESPA1A2RU30 521 aaPredicted RBP30.75■■■□□ 2.51
HLA-C-204ENST00000415537 UQCRFS1P1P0C7P4 283 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 MS4A1P11836 297 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 ARID4AP29374 1257 aaPredicted RBP30.75■■■□□ 2.51
HLA-C-204ENST00000415537 GTF2A2P52657 109 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 PKN2Q16513 984 aaKnown RBP30.75■■■□□ 2.51
HLA-C-204ENST00000415537 ZKSCAN4Q969J2 545 aaPredicted RBP30.75■■■□□ 2.51
HLA-C-204ENST00000415537 GPR108Q9NPR9 543 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 FAM198AQ9UFP1 575 aa30.75■■■□□ 2.51
HLA-C-204ENST00000415537 FAM163AQ96GL9 167 aaPredicted RBP30.74■■■□□ 2.51
HLA-C-204ENST00000415537 ERO1BQ86YB8 467 aa30.73■■■□□ 2.51
HLA-C-204ENST00000415537 PANK1Q8TE04 598 aa30.73■■■□□ 2.51
HLA-C-204ENST00000415537 MS4A4AQ96JQ5 239 aa30.73■■■□□ 2.51
HLA-C-204ENST00000415537 SNCAIPQ9Y6H5 919 aa30.73■■■□□ 2.51
HLA-C-204ENST00000415537 SPDYE5A6NIY4 337 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 MECOMQ03112 1051 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 TNNI3KQ59H18 835 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 CCDC158Q5M9N0 1113 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 PI16Q6UXB8 463 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 PTPN18Q99952 460 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 FPGT-TNNI3KV9GXZ4 949 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 MROH7-TTC4A0A0A0MT08 1334 aa30.72■■■□□ 2.51
HLA-C-204ENST00000415537 CCL15-CCL14A0A0B4J2E2 113 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 BTDP43251 543 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 GSTO1P78417 241 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 CCL15Q16663 113 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 TTC39AQ5SRH9 613 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 IDI2Q9BXS1 227 aa30.71■■■□□ 2.51
HLA-C-204ENST00000415537 ENTPD3O75355 529 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 LDHCP07864 332 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 MCAMP43121 646 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 RGS3P49796 1198 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 TBC1D9Q6ZT07 1266 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 RAI14Q9P0K7 980 aa30.7■■■□□ 2.51
HLA-C-204ENST00000415537 NOP58Q9Y2X3 529 aaKnown RBP30.7■■■□□ 2.51
HLA-C-204ENST00000415537 CRHR2Q13324 411 aa30.69■■■□□ 2.5
HLA-C-204ENST00000415537 ZSCAN29Q8IWY8 852 aaPredicted RBP30.69■■■□□ 2.5
HLA-C-204ENST00000415537 BRI3BPQ8WY22 251 aa30.69■■■□□ 2.5
HLA-C-204ENST00000415537 INPP5BP32019 993 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 CEP85Q6P2H3 762 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 ZFPM1Q8IX07 1006 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 DBNDD2Q9BQY9 259 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 LRP2BPQ9P2M1 347 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 DOCK2Q92608 1830 aa30.68■■■□□ 2.5
HLA-C-204ENST00000415537 GPR75-ASB3A0A0A6YYF3 556 aa30.67■■■□□ 2.5
HLA-C-204ENST00000415537 CETPP11597 493 aa30.67■■■□□ 2.5
HLA-C-204ENST00000415537 ZNF112Q9UJU3 913 aa30.67■■■□□ 2.5
HLA-C-204ENST00000415537 IRF6O14896 467 aa30.66■■■□□ 2.5
HLA-C-204ENST00000415537 PPATQ06203 517 aa30.66■■■□□ 2.5
HLA-C-204ENST00000415537 PPIL2Q13356 520 aa30.66■■■□□ 2.5
HLA-C-204ENST00000415537 SNAPC2Q13487 334 aa30.66■■■□□ 2.5
HLA-C-204ENST00000415537 PICALMQ13492 652 aa30.66■■■□□ 2.5
HLA-C-204ENST00000415537 NSUN4Q96CB9 384 aaKnown RBP30.66■■■□□ 2.5
HLA-C-204ENST00000415537 WDHD1O75717 1129 aaPredicted RBP30.65■■■□□ 2.5
HLA-C-204ENST00000415537 TAF1CQ15572 869 aaPredicted RBP30.65■■■□□ 2.5
HLA-C-204ENST00000415537 HPS5Q9UPZ3 1129 aa30.65■■■□□ 2.5
HLA-C-204ENST00000415537 FBXO46Q6PJ61 603 aaPredicted RBP30.64■■■□□ 2.5
HLA-C-204ENST00000415537 ZNF384Q8TF68 577 aa30.64■■■□□ 2.5
HLA-C-204ENST00000415537 ERO1AQ96HE7 468 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms