RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SCN7AQ01118 1682 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 PCCAP05165 728 aaPredicted RBP23.55■■□□□ 1.36
AP1S3-205ENST00000415298 ATP8B2P98198 1209 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 FILIP1Q7Z7B0 1213 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 SRRTQ9BXP5 876 aaKnown RBP23.55■■□□□ 1.36
AP1S3-205ENST00000415298 LRMPQ12912 555 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 HDAC1Q13547 482 aaPredicted RBP23.55■■□□□ 1.36
AP1S3-205ENST00000415298 NFIXQ14938 502 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 DNAJC14Q6Y2X3 702 aaPredicted RBP23.55■■□□□ 1.36
AP1S3-205ENST00000415298 SH3GL3Q99963 347 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 STK32BQ9NY57 414 aa23.55■■□□□ 1.36
AP1S3-205ENST00000415298 ELP1O95163 1332 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 TRAF1Q13077 416 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 SETDB2Q96T68 719 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 NEFHP12036 1026 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 FOXO4P98177 505 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 PTPN14Q15678 1187 aa23.54■■□□□ 1.36
AP1S3-205ENST00000415298 CCDC85AQ96PX6 553 aaPredicted RBP23.54■■□□□ 1.36
AP1S3-205ENST00000415298 SRGAP3O43295 1099 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 NEDD9Q14511 834 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 ERC1Q8IUD2 1116 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 CCDC26Q8TAB7 109 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 UTP14AQ9BVJ6 771 aaKnown RBP23.53■■□□□ 1.36
AP1S3-205ENST00000415298 NTSR2O95665 410 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 HMGB2P26583 209 aaKnown RBP23.53■■□□□ 1.36
AP1S3-205ENST00000415298 ANKRD45Q5TZF3 282 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 NYAP1Q6ZVC0 841 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 VEZTQ9HBM0 779 aa23.53■■□□□ 1.36
AP1S3-205ENST00000415298 CPSF2Q9P2I0 782 aaKnown RBP23.53■■□□□ 1.36
AP1S3-205ENST00000415298 GCFC2P16383 781 aaKnown RBP23.52■■□□□ 1.36
AP1S3-205ENST00000415298 HNRNPH1P31943 449 aaKnown RBP23.52■■□□□ 1.36
AP1S3-205ENST00000415298 MICALL1Q8N3F8 863 aa23.52■■□□□ 1.36
AP1S3-205ENST00000415298 RWDD2BP57060 319 aa23.52■■□□□ 1.35
AP1S3-205ENST00000415298 PARP10Q53GL7 1025 aa23.52■■□□□ 1.35
AP1S3-205ENST00000415298 WWC2Q6AWC2 1192 aa23.52■■□□□ 1.35
AP1S3-205ENST00000415298 ZSCAN25Q6NSZ9 544 aa23.52■■□□□ 1.35
AP1S3-205ENST00000415298 CWC27Q6UX04 472 aaKnown RBP23.52■■□□□ 1.35
AP1S3-205ENST00000415298 ZGPATQ8N5A5 531 aaKnown RBP23.52■■□□□ 1.35
AP1S3-205ENST00000415298 TRIM6Q9C030 488 aaPredicted RBP23.52■■□□□ 1.35
AP1S3-205ENST00000415298 IRS4O14654 1257 aaPredicted RBP23.51■■□□□ 1.35
AP1S3-205ENST00000415298 KINO60870 393 aaKnown RBP23.51■■□□□ 1.35
AP1S3-205ENST00000415298 GRIK3Q13003 919 aa23.51■■□□□ 1.35
AP1S3-205ENST00000415298 MSL1Q68DK7 614 aa23.51■■□□□ 1.35
AP1S3-205ENST00000415298 LMBR1LQ6UX01 489 aa23.51■■□□□ 1.35
AP1S3-205ENST00000415298 ARMCX6Q7L4S7 300 aa23.51■■□□□ 1.35
AP1S3-205ENST00000415298 KLHDC4Q8TBB5 520 aa23.51■■□□□ 1.35
AP1S3-205ENST00000415298 ERFEQ4G0M1 354 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 ARHGAP29Q52LW3 1261 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 FOXR1Q6PIV2 292 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 SUDS3Q9H7L9 328 aaPredicted RBP23.5■■□□□ 1.35
AP1S3-205ENST00000415298 MYBL2P10244 700 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 BMP2KLQ5H9B9 411 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 TSHZ1Q6ZSZ6 1077 aa23.5■■□□□ 1.35
AP1S3-205ENST00000415298 ZNF483Q8TF39 744 aaPredicted RBP23.5■■□□□ 1.35
AP1S3-205ENST00000415298 SH3TC1Q8TE82 1336 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 APBB1O00213 710 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 ANAPC4Q9UJX5 808 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 PA2G4Q9UQ80 394 aaKnown RBP23.49■■□□□ 1.35
AP1S3-205ENST00000415298 CHMP3Q9Y3E7 222 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 MX1P20591 662 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 CASTP20810 708 aaKnown RBP23.49■■□□□ 1.35
AP1S3-205ENST00000415298 SSH3Q8TE77 659 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 FAM107BQ9H098 131 aa23.49■■□□□ 1.35
AP1S3-205ENST00000415298 TM4SF1P30408 202 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 SETDB1Q15047 1291 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 FLAD1Q8NFF5 587 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 RGL2O15211 777 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 MTX1Q13505 466 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 POLA2Q14181 598 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 CRYMQ14894 314 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 RABL6Q3YEC7 729 aaPredicted RBP23.48■■□□□ 1.35
AP1S3-205ENST00000415298 L2HGDHQ9H9P8 463 aa23.48■■□□□ 1.35
AP1S3-205ENST00000415298 GOLGB1Q14789 3259 aaKnown RBP23.47■■□□□ 1.35
AP1S3-205ENST00000415298 EIF3JO75822 258 aaKnown RBP23.47■■□□□ 1.35
AP1S3-205ENST00000415298 DDR1Q08345 913 aa23.47■■□□□ 1.35
AP1S3-205ENST00000415298 RINLQ6ZS11 566 aa23.47■■□□□ 1.35
AP1S3-205ENST00000415298 PRPF38AQ8NAV1 312 aaKnown RBP23.47■■□□□ 1.35
AP1S3-205ENST00000415298 THOC1Q96FV9 657 aaKnown RBP23.47■■□□□ 1.35
AP1S3-205ENST00000415298 DCTPP1Q9H773 170 aa23.47■■□□□ 1.35
AP1S3-205ENST00000415298 ERLIN2O94905 339 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 C3orf67Q6ZVT6 689 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 CTCFLQ8NI51 663 aaPredicted RBP23.46■■□□□ 1.35
AP1S3-205ENST00000415298 SPATS2LQ9NUQ6 558 aaKnown RBP23.46■■□□□ 1.35
AP1S3-205ENST00000415298 MCM8Q9UJA3 840 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 CDHR2Q9BYE9 1310 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 KAT2BQ92831 832 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 FUCA2Q9BTY2 467 aa23.46■■□□□ 1.35
AP1S3-205ENST00000415298 GADD45BO75293 160 aaPredicted RBP23.45■■□□□ 1.34
AP1S3-205ENST00000415298 TBC1D8O95759 1140 aa23.45■■□□□ 1.34
AP1S3-205ENST00000415298 ICA1Q05084 483 aa23.45■■□□□ 1.34
AP1S3-205ENST00000415298 KCNV1Q6PIU1 500 aa23.45■■□□□ 1.34
AP1S3-205ENST00000415298 CPLX2Q6PUV4 134 aaKnown RBP23.45■■□□□ 1.34
AP1S3-205ENST00000415298 LRRC31Q6UY01 552 aa23.45■■□□□ 1.34
AP1S3-205ENST00000415298 TMTC2Q8N394 836 aa23.45■■□□□ 1.34
AP1S3-205ENST00000415298 HMMRO75330 724 aa23.44■■□□□ 1.34
AP1S3-205ENST00000415298 TTLL11Q8NHH1 800 aa23.44■■□□□ 1.34
AP1S3-205ENST00000415298 JPH2Q9BR39 696 aaPredicted RBP23.44■■□□□ 1.34
AP1S3-205ENST00000415298 NRDCO43847 1150 aa23.44■■□□□ 1.34
AP1S3-205ENST00000415298 BRD1O95696 1058 aa23.44■■□□□ 1.34
AP1S3-205ENST00000415298 TPTE2Q6XPS3 522 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms