RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
SHANK3-202ENST00000414786 LARGE2Q8N3Y3 721 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 MIPOL1Q8TD10 442 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 IGBP1P78318 339 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 TPTE2Q6XPS3 522 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 EHBP1Q8NDI1 1231 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 BCS1LQ9Y276 419 aa20.71■□□□□ 0.91
SHANK3-202ENST00000414786 DTHD1Q6ZMT9 781 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 GADL1Q6ZQY3 521 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 CCDC125Q86Z20 511 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 TBC1D9Q6ZT07 1266 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 LMBR1Q8WVP7 490 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 NXNQ6DKJ4 435 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 SCYL2Q6P3W7 929 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 INTS8Q75QN2 995 aaKnown RBP20.7■□□□□ 0.9
SHANK3-202ENST00000414786 NUF2Q9BZD4 464 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 TEX11Q8IYF3 940 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 TNFAIP3P21580 790 aa20.7■□□□□ 0.9
SHANK3-202ENST00000414786 RBM17Q96I25 401 aaKnown RBP20.7■□□□□ 0.9
SHANK3-202ENST00000414786 ARHGEF2Q92974 986 aaKnown RBP20.69■□□□□ 0.9
SHANK3-202ENST00000414786 PYM1Q9BRP8 204 aaKnown RBP20.69■□□□□ 0.9
SHANK3-202ENST00000414786 CALCOCO1Q9P1Z2 691 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 EPB41P11171 864 aaKnown RBP20.69■□□□□ 0.9
SHANK3-202ENST00000414786 KIF22Q14807 665 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 CAPN12Q6ZSI9 719 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 MGARPQ8TDB4 240 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 ITM2BQ9Y287 266 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 NYXQ9GZU5 481 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 KIF3CO14782 793 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 ALDH3A1P30838 453 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 GTF2A1P52655 376 aaPredicted RBP20.69■□□□□ 0.9
SHANK3-202ENST00000414786 UTP14CQ5TAP6 766 aaKnown RBP20.69■□□□□ 0.9
SHANK3-202ENST00000414786 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
SHANK3-202ENST00000414786 IRS4O14654 1257 aaPredicted RBP20.68■□□□□ 0.9
SHANK3-202ENST00000414786 BEND3Q5T5X7 828 aa20.68■□□□□ 0.9
SHANK3-202ENST00000414786 OLA1Q9NTK5 396 aaKnown RBP20.68■□□□□ 0.9
SHANK3-202ENST00000414786 CALCOCO2Q13137 446 aa20.68■□□□□ 0.9
SHANK3-202ENST00000414786 STIM2Q9P246 746 aa20.68■□□□□ 0.9
SHANK3-202ENST00000414786 CALML3P27482 149 aa20.68■□□□□ 0.9
SHANK3-202ENST00000414786 BAG1Q99933 345 aaPredicted RBP20.68■□□□□ 0.9
SHANK3-202ENST00000414786 AZI2Q9H6S1 392 aa20.68■□□□□ 0.9
SHANK3-202ENST00000414786 RBM8AQ9Y5S9 174 aaKnown RBP20.68■□□□□ 0.9
SHANK3-202ENST00000414786 SKILP12757 684 aa20.67■□□□□ 0.9
SHANK3-202ENST00000414786 SETDB1Q15047 1291 aa20.67■□□□□ 0.9
SHANK3-202ENST00000414786 FAM193BQ96PV7 902 aaPredicted RBP20.67■□□□□ 0.9
SHANK3-202ENST00000414786 STK10O94804 968 aaKnown RBP20.67■□□□□ 0.9
SHANK3-202ENST00000414786 TXKP42681 527 aa20.67■□□□□ 0.9
SHANK3-202ENST00000414786 DDX27Q96GQ7 796 aaKnown RBP20.67■□□□□ 0.9
SHANK3-202ENST00000414786 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
SHANK3-202ENST00000414786 CTAGE1Q96RT6 745 aa20.67■□□□□ 0.9
SHANK3-202ENST00000414786 SLC12A1Q13621 1099 aa20.67■□□□□ 0.9
SHANK3-202ENST00000414786 SMTNP53814 917 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 ARPP19P56211 112 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 IRX3P78415 501 aaPredicted RBP20.66■□□□□ 0.9
SHANK3-202ENST00000414786 KIFAP3Q92845 792 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 RMDN2Q96LZ7 410 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 SLC52A1Q9NWF4 448 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 NFATC2IPQ8NCF5 419 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 PRG4Q92954 1404 aaPredicted RBP20.66■□□□□ 0.9
SHANK3-202ENST00000414786 MMS19Q96T76 1030 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 VPS16Q9H269 839 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 ZNF653Q96CK0 615 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 PAG1Q9NWQ8 432 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 TRIM75PA6NK02 468 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 ARID4AP29374 1257 aaPredicted RBP20.66■□□□□ 0.9
SHANK3-202ENST00000414786 HSPA2P54652 639 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 DNM1Q05193 864 aaKnown RBP20.66■□□□□ 0.9
SHANK3-202ENST00000414786 DCUN1D2Q6PH85 259 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 DYMQ7RTS9 669 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 TTC14Q96N46 770 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 CARD10Q9BWT7 1032 aa20.66■□□□□ 0.9
SHANK3-202ENST00000414786 MTRF1LQ9UGC7 380 aaKnown RBP20.66■□□□□ 0.9
SHANK3-202ENST00000414786 CNNM2Q9H8M5 875 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 SAMD15Q9P1V8 674 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 hCG_1642624A0A1W2PR95 340 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 CFBP00751 764 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 NMIQ13287 307 aaPredicted RBP20.65■□□□□ 0.9
SHANK3-202ENST00000414786 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
SHANK3-202ENST00000414786 DDX17Q92841 729 aaKnown RBP20.65■□□□□ 0.9
SHANK3-202ENST00000414786 MTUS1Q9ULD2 1270 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 YARSP54577 528 aaKnown RBP20.65■□□□□ 0.9
SHANK3-202ENST00000414786 NEDD9Q14511 834 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 ATAD2Q6PL18 1390 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 CAPN2P17655 700 aa20.65■□□□□ 0.9
SHANK3-202ENST00000414786 SYNDIG1LA6NDD5 238 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 BNIP3LO60238 219 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 CCDC186Q7Z3E2 898 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 EYA3Q99504 573 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 AATFQ9NY61 560 aaKnown RBP eCLIP20.64■□□□□ 0.89
SHANK3-202ENST00000414786 GNAQP50148 359 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 GLG1Q92896 1179 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 OPA1O60313 960 aa20.64■□□□□ 0.89
SHANK3-202ENST00000414786 RPS6KA2Q15349 733 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms