RNA–Protein interactions for RNA: ENST00000414302.6

VNN3-204, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-204ENST00000414302 USP40Q9NVE5 1235 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
VNN3-204ENST00000414302 PDS5AQ29RF7 1337 aaKnown RBP12.11□□□□□ -0.47
VNN3-204ENST00000414302 USP2O75604 605 aaPredicted RBP12.11□□□□□ -0.47
VNN3-204ENST00000414302 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
VNN3-204ENST00000414302 MCAMP43121 646 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 TCP10Q12799 353 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 SPTY2D1Q68D10 685 aaPredicted RBP12.11□□□□□ -0.47
VNN3-204ENST00000414302 CDC42EP5Q6NZY7 148 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 RNF186Q9NXI6 227 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
VNN3-204ENST00000414302 CAPN15O75808 1086 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 MECOMQ03112 1051 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 NFIAQ12857 509 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 MAP3K11Q16584 847 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 RPAP2Q8IXW5 612 aaPredicted RBP12.1□□□□□ -0.47
VNN3-204ENST00000414302 ANKRD13AQ8IZ07 590 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 EAF2Q96CJ1 260 aaPredicted RBP12.1□□□□□ -0.47
VNN3-204ENST00000414302 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
VNN3-204ENST00000414302 ELP3Q9H9T3 547 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 IL1RAPL2Q9NP60 686 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 LRP2BPQ9P2M1 347 aa12.1□□□□□ -0.47
VNN3-204ENST00000414302 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
VNN3-204ENST00000414302 ZBTB22O15209 634 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 HMMRO75330 724 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 BTDP43251 543 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 FAM83AQ86UY5 434 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 AACSQ86V21 672 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
VNN3-204ENST00000414302 FAM151AQ8WW52 585 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 WNK4Q96J92 1243 aa12.09□□□□□ -0.47
VNN3-204ENST00000414302 MROH7-TTC4A0A0A0MT08 1334 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 GAKO14976 1311 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 PICALMQ13492 652 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 VGLL4Q14135 290 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 FKBP1CQ5VVH2 108 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 SIRT2Q8IXJ6 389 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 RHPN1Q8TCX5 695 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 SAGE1Q9NXZ1 904 aa12.08□□□□□ -0.48
VNN3-204ENST00000414302 ZAP70P43403 619 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 RGS3P49796 1198 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 GSTO1P78417 241 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 MAP3K9P80192 1104 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.07□□□□□ -0.48
VNN3-204ENST00000414302 ZFPM1Q8IX07 1006 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.07□□□□□ -0.48
VNN3-204ENST00000414302 ZNF384Q8TF68 577 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 CNKSR2Q8WXI2 1034 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 NSUN4Q96CB9 384 aaKnown RBP12.07□□□□□ -0.48
VNN3-204ENST00000414302 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 WRNIP1Q96S55 665 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 FAM198AQ9UFP1 575 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 CSADQ9Y600 493 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
VNN3-204ENST00000414302 MANSC4A6NHS7 340 aaPredicted RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 TBC1D8O95759 1140 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 LDHCP07864 332 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 GJA5P36382 358 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 DCAF15Q66K64 600 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 ZKSCAN4Q969J2 545 aaPredicted RBP12.06□□□□□ -0.48
VNN3-204ENST00000414302 OTUD5Q96G74 571 aa12.06□□□□□ -0.48
VNN3-204ENST00000414302 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 GPR75-ASB3A0A0A6YYF3 556 aa12.05□□□□□ -0.48
VNN3-204ENST00000414302 IFIT2P09913 472 aaKnown RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 TM4SF4P48230 202 aa12.05□□□□□ -0.48
VNN3-204ENST00000414302 RRP1P56182 461 aaKnown RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 NAA16Q6N069 864 aaPredicted RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
VNN3-204ENST00000414302 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 ZNF512BQ96KM6 892 aaPredicted RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 NOL10Q9BSC4 688 aaKnown RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 IDI2Q9BXS1 227 aa12.05□□□□□ -0.48
VNN3-204ENST00000414302 ZNF341Q9BYN7 854 aa12.05□□□□□ -0.48
VNN3-204ENST00000414302 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
VNN3-204ENST00000414302 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
VNN3-204ENST00000414302 RAB11FIP3O75154 756 aa12.04□□□□□ -0.48
VNN3-204ENST00000414302 ENTPD3O75355 529 aa12.04□□□□□ -0.48
VNN3-204ENST00000414302 WDHD1O75717 1129 aaPredicted RBP12.04□□□□□ -0.48
VNN3-204ENST00000414302 IDH1O75874 414 aaKnown RBP12.04□□□□□ -0.48
VNN3-204ENST00000414302 DDX4Q9NQI0 724 aaKnown RBP12.04□□□□□ -0.48
VNN3-204ENST00000414302 AATFQ9NY61 560 aaKnown RBP eCLIP12.04□□□□□ -0.48
VNN3-204ENST00000414302 SNCAIPQ9Y6H5 919 aa12.04□□□□□ -0.48
VNN3-204ENST00000414302 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
VNN3-204ENST00000414302 IGF2BP3O00425 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms