RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 TRIOBPQ9H2D6 2365 aa10.47□□□□□ -0.73
UPF3AP1-201ENST00000413731 PPP1R12BO60237 982 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 TWISTNBQ3B726 338 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 C15orf52Q6ZUT6 534 aaKnown RBP10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 CDAN1Q8IWY9 1227 aa10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 ARMC5Q96C12 935 aa10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 PRMT6Q96LA8 375 aaPredicted RBP10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 PTPN18Q99952 460 aa10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 CHMP4AQ9BY43 222 aa10.46□□□□□ -0.73
UPF3AP1-201ENST00000413731 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 ANKRD18BA2A2Z9 1011 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 MYO1BO43795 1136 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 TBC1D12O60347 775 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 USP2O75604 605 aaPredicted RBP10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 IL1R1P14778 569 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 IREB2P48200 963 aaKnown RBP10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 INHBEP58166 350 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 FKBP5Q13451 457 aaPredicted RBP10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 INTS3Q68E01 1043 aaKnown RBP10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 ZNF804AQ7Z570 1209 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 DNAAF4Q8WXU2 420 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 ELP3Q9H9T3 547 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 CHMP3Q9Y3E7 222 aa10.45□□□□□ -0.74
UPF3AP1-201ENST00000413731 FKBP1AP62942 108 aaKnown RBP10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 FOXO4P98177 505 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 RASA3Q14644 834 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 SUPT20HL1Q3ZLR7 823 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 ANKRD13AQ8IZ07 590 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 LINS1Q8NG48 757 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 OPTNQ96CV9 577 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 EFCC1Q9HA90 598 aa10.44□□□□□ -0.74
UPF3AP1-201ENST00000413731 AK9Q5TCS8 1911 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 MGAMO43451 1857 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 UNCXA6NJT0 531 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 E9PSI1 815 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 RBM5P52756 815 aaKnown RBP eCLIP10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 SP3Q02447 781 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 EXOSC9Q06265 439 aaKnown RBP10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 IFIT5Q13325 482 aaKnown RBP10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 OTUD7BQ6GQQ9 843 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 PDCD7Q8N8D1 485 aaKnown RBP10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 BRI3BPQ8WY22 251 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 ZNF594Q96JF6 807 aaPredicted RBP10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 ZNF333Q96JL9 665 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 PTCH2Q9Y6C5 1203 aa10.43□□□□□ -0.74
UPF3AP1-201ENST00000413731 FAM205AQ6ZU69 1335 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 F6X3S4 739 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 MS4A1P11836 297 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 PDIA4P13667 645 aaKnown RBP10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 FXR1P51114 621 aaKnown RBP eCLIP10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 HNRNPUQ00839 825 aaKnown RBP eCLIP10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 VGLL4Q14135 290 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 MFSD14BQ5SR56 506 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 TEPSINQ96N21 525 aa10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 ZNF70Q9UC06 446 aaPredicted RBP10.42□□□□□ -0.74
UPF3AP1-201ENST00000413731 CCL15-CCL14A0A0B4J2E2 113 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TCP10L2B9ZVM9 353 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 PLIN1O60240 522 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 MYCP01106 439 aaPredicted RBP10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 GYG1P46976 350 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TNFAIP1Q13829 316 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TAF1CQ15572 869 aaPredicted RBP10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 CCL15Q16663 113 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 LMBR1LQ6UX01 489 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 FAM43AQ8N2R8 423 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TMEM39BQ9GZU3 492 aa10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TDRD3Q9H7E2 651 aaKnown RBP10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 TTF2Q9UNY4 1162 aaKnown RBP10.41□□□□□ -0.74
UPF3AP1-201ENST00000413731 DOCK2Q92608 1830 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 C19orf67A6NJJ6 358 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 A6NJR5 290 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 TRAK2O60296 914 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 CRKP46108 304 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 PTGDRQ13258 359 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 GRIK5Q16478 980 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 SLC9C1Q4G0N8 1177 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 TAF7LQ5H9L4 462 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 BEND3Q5T5X7 828 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 CCDC82Q8N4S0 544 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 TDRD7Q8NHU6 1098 aaKnown RBP10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 OTUD5Q96G74 571 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 ARHGAP39Q9C0H5 1083 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 CNNM1Q9NRU3 951 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 PTPRFP10586 1907 aa10.4□□□□□ -0.74
UPF3AP1-201ENST00000413731 GRM8O00222 908 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 EVI5O60447 810 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 VAMP4O75379 141 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 CACNB3P54284 484 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 SLFN5Q08AF3 891 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 CCDC57Q2TAC2 916 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 LDHAL6AQ6ZMR3 332 aa10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 DZIP1LQ8IYY4 767 aaKnown RBP10.39□□□□□ -0.75
UPF3AP1-201ENST00000413731 OXER1Q8TDS5 423 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms