RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 FKBP1CQ5VVH2 108 aa32.4■■■□□ 2.78
VEGFA-207ENST00000413642 FAM83AQ86UY5 434 aa32.4■■■□□ 2.78
VEGFA-207ENST00000413642 DZIP1Q86YF9 867 aaKnown RBP32.4■■■□□ 2.78
VEGFA-207ENST00000413642 ZBTB40Q9NUA8 1239 aa32.4■■■□□ 2.78
VEGFA-207ENST00000413642 REM2Q8IYK8 340 aaPredicted RBP32.39■■■□□ 2.78
VEGFA-207ENST00000413642 WNK4Q96J92 1243 aa32.39■■■□□ 2.78
VEGFA-207ENST00000413642 SNRKQ9NRH2 765 aa32.39■■■□□ 2.78
VEGFA-207ENST00000413642 SAGE1Q9NXZ1 904 aa32.39■■■□□ 2.78
VEGFA-207ENST00000413642 TLR7Q9NYK1 1049 aaKnown RBP32.39■■■□□ 2.78
VEGFA-207ENST00000413642 DDX19BQ9UMR2 479 aa32.39■■■□□ 2.78
VEGFA-207ENST00000413642 TCP10Q12799 353 aa32.38■■■□□ 2.77
VEGFA-207ENST00000413642 ANKRD13AQ8IZ07 590 aa32.38■■■□□ 2.77
VEGFA-207ENST00000413642 ZNF384Q8TF68 577 aa32.38■■■□□ 2.77
VEGFA-207ENST00000413642 CCDC8Q9H0W5 538 aaPredicted RBP32.38■■■□□ 2.77
VEGFA-207ENST00000413642 GAKO14976 1311 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 GJA5P36382 358 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 TM4SF4P48230 202 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 MECOMQ03112 1051 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 SPTY2D1Q68D10 685 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-207ENST00000413642 ERICH6Q7L0X2 663 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 EAF2Q96CJ1 260 aaPredicted RBP32.37■■■□□ 2.77
VEGFA-207ENST00000413642 ELP3Q9H9T3 547 aa32.37■■■□□ 2.77
VEGFA-207ENST00000413642 UQCRFS1P1P0C7P4 283 aa32.36■■■□□ 2.77
VEGFA-207ENST00000413642 TTC39AQ5SRH9 613 aa32.36■■■□□ 2.77
VEGFA-207ENST00000413642 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.36■■■□□ 2.77
VEGFA-207ENST00000413642 SIRT2Q8IXJ6 389 aa32.36■■■□□ 2.77
VEGFA-207ENST00000413642 FAM198AQ9UFP1 575 aa32.36■■■□□ 2.77
VEGFA-207ENST00000413642 DBNLQ9UJU6 430 aaKnown RBP32.36■■■□□ 2.77
VEGFA-207ENST00000413642 ZFPM1Q8IX07 1006 aa32.35■■■□□ 2.77
VEGFA-207ENST00000413642 FAM151AQ8WW52 585 aa32.35■■■□□ 2.77
VEGFA-207ENST00000413642 UNCXA6NJT0 531 aa32.34■■■□□ 2.77
VEGFA-207ENST00000413642 CCDC158Q5M9N0 1113 aa32.34■■■□□ 2.77
VEGFA-207ENST00000413642 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.34■■■□□ 2.771e-6■□□□□ 11.1
VEGFA-207ENST00000413642 MAP3K9P80192 1104 aa32.33■■■□□ 2.77
VEGFA-207ENST00000413642 MIGA2Q7L4E1 593 aa32.33■■■□□ 2.77
VEGFA-207ENST00000413642 CNKSR2Q8WXI2 1034 aa32.33■■■□□ 2.77
VEGFA-207ENST00000413642 FAM163AQ96GL9 167 aaPredicted RBP32.33■■■□□ 2.77
VEGFA-207ENST00000413642 TBC1D8O95759 1140 aa32.32■■■□□ 2.76
VEGFA-207ENST00000413642 BTDP43251 543 aa32.32■■■□□ 2.76
VEGFA-207ENST00000413642 VGLL4Q14135 290 aa32.32■■■□□ 2.76
VEGFA-207ENST00000413642 RPAP2Q8IXW5 612 aaPredicted RBP32.32■■■□□ 2.76
VEGFA-207ENST00000413642 RAI14Q9P0K7 980 aa32.32■■■□□ 2.76
VEGFA-207ENST00000413642 MROH7-TTC4A0A0A0MT08 1334 aa32.31■■■□□ 2.76
VEGFA-207ENST00000413642 ZBTB48P10074 688 aaPredicted RBP32.31■■■□□ 2.76
VEGFA-207ENST00000413642 SREBF2Q12772 1141 aa32.31■■■□□ 2.76
VEGFA-207ENST00000413642 PDE3AQ14432 1141 aa32.31■■■□□ 2.76
VEGFA-207ENST00000413642 NSUN4Q96CB9 384 aaKnown RBP32.31■■■□□ 2.76
VEGFA-207ENST00000413642 RGS3P49796 1198 aa32.3■■■□□ 2.76
VEGFA-207ENST00000413642 SLF2Q8IX21 1173 aa32.3■■■□□ 2.76
VEGFA-207ENST00000413642 OPTNQ96CV9 577 aa32.3■■■□□ 2.76
VEGFA-207ENST00000413642 YTHDC1Q96MU7 727 aaKnown RBP32.3■■■□□ 2.76
VEGFA-207ENST00000413642 IL1RAPL2Q9NP60 686 aa32.3■■■□□ 2.76
VEGFA-207ENST00000413642 APBB1O00213 710 aa32.29■■■□□ 2.76
VEGFA-207ENST00000413642 GOLGA6L2Q8N9W4 650 aaPredicted RBP32.29■■■□□ 2.76
VEGFA-207ENST00000413642 LRP2BPQ9P2M1 347 aa32.29■■■□□ 2.76
VEGFA-207ENST00000413642 RPAP1Q9BWH6 1393 aaPredicted RBP32.29■■■□□ 2.76
VEGFA-207ENST00000413642 GPR75-ASB3A0A0A6YYF3 556 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 MANSC4A6NHS7 340 aaPredicted RBP32.28■■■□□ 2.76
VEGFA-207ENST00000413642 ZAP70P43403 619 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 AACSQ86V21 672 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 ZKSCAN4Q969J2 545 aaPredicted RBP32.28■■■□□ 2.76
VEGFA-207ENST00000413642 WRNIP1Q96S55 665 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 IDI2Q9BXS1 227 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 R3HDMLQ9H3Y0 253 aa32.28■■■□□ 2.76
VEGFA-207ENST00000413642 DDX4Q9NQI0 724 aaKnown RBP32.28■■■□□ 2.76
VEGFA-207ENST00000413642 WDHD1O75717 1129 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-207ENST00000413642 CYP2E1P05181 493 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-207ENST00000413642 ERC1Q8IUD2 1116 aa32.27■■■□□ 2.76
VEGFA-207ENST00000413642 RHPN1Q8TCX5 695 aa32.27■■■□□ 2.76
VEGFA-207ENST00000413642 ZNF512BQ96KM6 892 aaPredicted RBP32.27■■■□□ 2.76
VEGFA-207ENST00000413642 CSADQ9Y600 493 aa32.27■■■□□ 2.76
VEGFA-207ENST00000413642 IGF2BP3O00425 579 aaKnown RBP eCLIP32.26■■■□□ 2.75
VEGFA-207ENST00000413642 RHBDL3P58872 404 aa32.26■■■□□ 2.75
VEGFA-207ENST00000413642 IFNL1Q8IU54 200 aa32.26■■■□□ 2.75
VEGFA-207ENST00000413642 PIH1D3Q9NQM4 214 aaKnown RBP32.26■■■□□ 2.75
VEGFA-207ENST00000413642 SNCAIPQ9Y6H5 919 aa32.26■■■□□ 2.75
VEGFA-207ENST00000413642 RFX7Q2KHR2 1363 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 PICALMQ13492 652 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 DCAF15Q66K64 600 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 SH3BP5LQ7L8J4 393 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 HOOK2Q96ED9 719 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 ZNF341Q9BYN7 854 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 BCL11AQ9H165 835 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 NDUFB9Q9Y6M9 179 aa32.25■■■□□ 2.75
VEGFA-207ENST00000413642 HMMRO75330 724 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 ENTPD3O75355 529 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 LDHCP07864 332 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 SLURP2P0DP57 97 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 INPP5BP32019 993 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 GSTO1P78417 241 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 HSP90AB4PQ58FF6 505 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 OTUD5Q96G74 571 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 ABHD8Q96I13 439 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 CHMP4BQ9H444 224 aaKnown RBP32.24■■■□□ 2.75
VEGFA-207ENST00000413642 OTOFQ9HC10 1997 aa32.24■■■□□ 2.75
VEGFA-207ENST00000413642 CASP8AP2Q9UKL3 1982 aa32.23■■■□□ 2.75
VEGFA-207ENST00000413642 PTPN18Q99952 460 aa32.23■■■□□ 2.75
VEGFA-207ENST00000413642 MCOLN1Q9GZU1 580 aa32.23■■■□□ 2.75
VEGFA-207ENST00000413642 INHBEP58166 350 aa32.22■■■□□ 2.75
VEGFA-207ENST00000413642 DGKZQ13574 1117 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms