RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 CDC42EP5Q6NZY7 148 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 ZNF384Q8TF68 577 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 NSUN4Q96CB9 384 aaKnown RBP12.33□□□□□ -0.44
TMEM248-202ENST00000413593 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
TMEM248-202ENST00000413593 TEPSINQ96N21 525 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 DCTPP1Q9H773 170 aa12.33□□□□□ -0.44
TMEM248-202ENST00000413593 UBE2Q2LH0YL09 131 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 IFIT2P09913 472 aaKnown RBP12.32□□□□□ -0.44
TMEM248-202ENST00000413593 PRKG1Q13976 671 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
TMEM248-202ENST00000413593 FAM83AQ86UY5 434 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 CDAN1Q8IWY9 1227 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 LRRCC1Q9C099 1032 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 TMEM39BQ9GZU3 492 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
TMEM248-202ENST00000413593 RAI14Q9P0K7 980 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 PAPPA2Q9BXP8 1791 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
TMEM248-202ENST00000413593 MROH7-TTC4A0A0A0MT08 1334 aa12.32□□□□□ -0.44
TMEM248-202ENST00000413593 FAM155AB1AL88 458 aaPredicted RBP12.31□□□□□ -0.44
TMEM248-202ENST00000413593 AOC2O75106 756 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 MAP2K2P36507 400 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 BTDP43251 543 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 ZNF157P51786 506 aaPredicted RBP12.31□□□□□ -0.44
TMEM248-202ENST00000413593 GSTO1P78417 241 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 NFIAQ12857 509 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 MAP3K11Q16584 847 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 ARMC9Q7Z3E5 817 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 CCDC102AQ96A19 550 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 USP40Q9NVE5 1235 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 ANGEL1Q9UNK9 670 aaKnown RBP12.31□□□□□ -0.44
TMEM248-202ENST00000413593 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 SUPT16HQ9Y5B9 1047 aaKnown RBP12.31□□□□□ -0.44
TMEM248-202ENST00000413593 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 MYH13Q9UKX3 1938 aa12.31□□□□□ -0.44
TMEM248-202ENST00000413593 GPR75-ASB3A0A0A6YYF3 556 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 PPP1R12BO60237 982 aaPredicted RBP12.3□□□□□ -0.44
TMEM248-202ENST00000413593 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
TMEM248-202ENST00000413593 IGSF3O75054 1194 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 LDHCP07864 332 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 SLC10A3P09131 477 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
TMEM248-202ENST00000413593 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
TMEM248-202ENST00000413593 NOGQ13253 232 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 AAMPQ13685 434 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 LDLRAD1Q5T700 205 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 IDI2Q9BXS1 227 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 RFX7Q2KHR2 1363 aa12.3□□□□□ -0.44
TMEM248-202ENST00000413593 RPAP1Q9BWH6 1393 aaPredicted RBP12.3□□□□□ -0.44
TMEM248-202ENST00000413593 THSD7BQ9C0I4 1608 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 RHBDL3P58872 404 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 NAA16Q6N069 864 aaPredicted RBP12.29□□□□□ -0.44
TMEM248-202ENST00000413593 RASAL3Q86YV0 1011 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.29□□□□□ -0.44
TMEM248-202ENST00000413593 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 ZIC5Q96T25 663 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 ANTXR1Q9H6X2 564 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 WBP1LQ9NX94 342 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 ECM29Q5VYK3 1845 aa12.29□□□□□ -0.44
TMEM248-202ENST00000413593 ENTPD3O75355 529 aa12.28□□□□□ -0.44
TMEM248-202ENST00000413593 USP2O75604 605 aaPredicted RBP12.28□□□□□ -0.44
TMEM248-202ENST00000413593 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
TMEM248-202ENST00000413593 IDH1O75874 414 aaKnown RBP12.28□□□□□ -0.44
TMEM248-202ENST00000413593 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
TMEM248-202ENST00000413593 RGS3P49796 1198 aa12.28□□□□□ -0.44
TMEM248-202ENST00000413593 MAP2K1Q02750 393 aaPredicted RBP12.28□□□□□ -0.44
TMEM248-202ENST00000413593 TCP10Q12799 353 aa12.28□□□□□ -0.44
TMEM248-202ENST00000413593 UNCXA6NJT0 531 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 MAP4K4O95819 1239 aaPredicted RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 ATP5JP18859 108 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 KIF23Q02241 960 aaPredicted RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 ADGRA1Q86SQ6 560 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 ZFPM1Q8IX07 1006 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 HOOK2Q96ED9 719 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
TMEM248-202ENST00000413593 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 DDX4Q9NQI0 724 aaKnown RBP12.27□□□□□ -0.45
TMEM248-202ENST00000413593 GOLIM4O00461 696 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 PPP4CP60510 307 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 MAP3K12Q12852 859 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 ANKRD13AQ8IZ07 590 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.26□□□□□ -0.45
TMEM248-202ENST00000413593 NOL10Q9BSC4 688 aaKnown RBP12.26□□□□□ -0.45
TMEM248-202ENST00000413593 BOLA2Q9H3K6 86 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 ECHDC1Q9NTX5 307 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 AATFQ9NY61 560 aaKnown RBP eCLIP12.26□□□□□ -0.45
TMEM248-202ENST00000413593 AKAP11Q9UKA4 1901 aa12.26□□□□□ -0.45
TMEM248-202ENST00000413593 FOXN1O15353 648 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 BAG3O95817 575 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 CYP7A1P22680 504 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 PICALMQ13492 652 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 DCAF15Q66K64 600 aa12.25□□□□□ -0.45
TMEM248-202ENST00000413593 TMED8Q6PL24 325 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms