RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ANP32CO43423 234 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 GNRH1P01148 92 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 MOGSQ13724 837 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 DCAF15Q66K64 600 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
LIMS2-210ENST00000413578 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
LIMS2-210ENST00000413578 INPP5BP32019 993 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 PRMT2P55345 433 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 ANKRD23Q86SG2 305 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 ZNF341Q9BYN7 854 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 DAGLAQ9Y4D2 1042 aa15.27■□□□□ 0.04
LIMS2-210ENST00000413578 EYA2O00167 538 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 WDHD1O75717 1129 aaPredicted RBP15.26■□□□□ 0.03
LIMS2-210ENST00000413578 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 NOL9Q5SY16 702 aaKnown RBP15.26■□□□□ 0.03
LIMS2-210ENST00000413578 MIGA2Q7L4E1 593 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 ATG9AQ7Z3C6 839 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 WDR66Q8TBY9 1149 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 LPIN2Q92539 896 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 SHISA4Q96DD7 197 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 CEP290O15078 2479 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 ZSWIM8A7E2V4 1837 aa15.26■□□□□ 0.03
LIMS2-210ENST00000413578 ATRNL1Q5VV63 1379 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 ZBTB22O15209 634 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 NFIAQ12857 509 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 KIF22Q14807 665 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 DIXDC1Q155Q3 683 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-210ENST00000413578 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 TRIM47Q96LD4 638 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 SRRDQ9UH36 339 aa15.25■□□□□ 0.03
LIMS2-210ENST00000413578 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
LIMS2-210ENST00000413578 PRDX5P30044 214 aa15.24■□□□□ 0.03
LIMS2-210ENST00000413578 CDC42EP5Q6NZY7 148 aa15.24■□□□□ 0.03
LIMS2-210ENST00000413578 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
LIMS2-210ENST00000413578 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
LIMS2-210ENST00000413578 CPA4Q9UI42 421 aa15.24■□□□□ 0.03
LIMS2-210ENST00000413578 SALL1Q9NSC2 1324 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 PDHXO00330 501 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 MYCP01106 439 aaPredicted RBP15.23■□□□□ 0.03
LIMS2-210ENST00000413578 SLC5A1P13866 664 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 MTFR1Q15390 333 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 UBE2Q1Q7Z7E8 422 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 RFX7Q2KHR2 1363 aa15.23■□□□□ 0.03
LIMS2-210ENST00000413578 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 SZT2Q5T011 3432 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 H0YGN5 161 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 BCRP11274 1271 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 OSBPP22059 807 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 PSMC4P43686 418 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 TCP10Q12799 353 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 GPAT2Q6NUI2 795 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
LIMS2-210ENST00000413578 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
LIMS2-210ENST00000413578 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
LIMS2-210ENST00000413578 E9PSI1 815 aa15.21■□□□□ 0.03
LIMS2-210ENST00000413578 CXCL11O14625 94 aa15.21■□□□□ 0.03
LIMS2-210ENST00000413578 CIAO1O76071 339 aa15.21■□□□□ 0.03
LIMS2-210ENST00000413578 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
LIMS2-210ENST00000413578 GRK4P32298 578 aa15.2■□□□□ 0.02
LIMS2-210ENST00000413578 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
LIMS2-210ENST00000413578 IDI2Q9BXS1 227 aa15.2■□□□□ 0.02
LIMS2-210ENST00000413578 GAKO14976 1311 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 A0A0G2JLL6 359 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-210ENST00000413578 SEMA3EO15041 775 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 LDHBP07195 334 aaKnown RBP15.19■□□□□ 0.02
LIMS2-210ENST00000413578 GJB1P08034 283 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 HOXD10P28358 340 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 PHKA1P46020 1223 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 GJA8P48165 433 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 SLFN5Q08AF3 891 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
LIMS2-210ENST00000413578 PARK7Q99497 189 aaKnown RBP15.19■□□□□ 0.02
LIMS2-210ENST00000413578 USP40Q9NVE5 1235 aa15.19■□□□□ 0.02
LIMS2-210ENST00000413578 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 ECM2O94769 699 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-210ENST00000413578 FMNL1O95466 1100 aaPredicted RBP15.18■□□□□ 0.02
LIMS2-210ENST00000413578 CYP2C8P10632 490 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 PRKCZQ05513 592 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 RAET1EQ8TD07 263 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 PRO3102Q9H379 93 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 DENND2AQ9ULE3 1009 aa15.18■□□□□ 0.02
LIMS2-210ENST00000413578 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-210ENST00000413578 ENTPD3O75355 529 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 CCL5P13501 91 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 PTPRAP18433 802 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
LIMS2-210ENST00000413578 RGS3P49796 1198 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 SIL1Q9H173 461 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
LIMS2-210ENST00000413578 CEP126Q9P2H0 1117 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 SLC45A1Q9Y2W3 748 aa15.17■□□□□ 0.02
LIMS2-210ENST00000413578 AFG3L2Q9Y4W6 797 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms