RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 FOXP2O15409 715 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 NSUN4Q96CB9 384 aaKnown RBP11.52□□□□□ -0.57
SMPD4-203ENST00000412570 LEMD3Q9Y2U8 911 aa11.52□□□□□ -0.57
SMPD4-203ENST00000412570 PRKG1Q13976 671 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 NFKBIBQ15653 356 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 SP8Q8IXZ3 490 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 UBE2Q2LH0YL09 131 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 PRC1O43663 620 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 PRAMEF18Q5VWM3 479 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 TEX11Q8IYF3 940 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 CERS5Q8N5B7 392 aa11.51□□□□□ -0.57
SMPD4-203ENST00000412570 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 CNKSR1Q969H4 720 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 NACAP1Q9BZK3 213 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 NEDD4P46934 1319 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 C4AP0C0L4 1744 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 CICQ96RK0 1608 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-203ENST00000412570 ZFYP08048 801 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-203ENST00000412570 SMC3Q9UQE7 1217 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 AK9Q5TCS8 1911 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 BAZ2BQ9UIF8 2168 aaKnown RBP11.5□□□□□ -0.57
SMPD4-203ENST00000412570 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
SMPD4-203ENST00000412570 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
SMPD4-203ENST00000412570 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 FZD1Q9UP38 647 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 MED23Q9ULK4 1368 aa11.5□□□□□ -0.57
SMPD4-203ENST00000412570 MYO5AQ9Y4I1 1855 aaKnown RBP11.49□□□□□ -0.57
SMPD4-203ENST00000412570 KLF18A0A0U1RQI7 1052 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 TCP10L2B9ZVM9 353 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 PIM2Q9P1W9 311 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 MYH3P11055 1940 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 TCRBV5S4A2TA0A5A2 114 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 ATP2B1P20020 1258 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 PSMA5P28066 241 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 DLK2Q6UY11 383 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 MFSD6Q6ZSS7 791 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 CYB5R4Q7L1T6 521 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 FHDC1Q9C0D6 1143 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-203ENST00000412570 TDRD3Q9H7E2 651 aaKnown RBP11.49□□□□□ -0.57
SMPD4-203ENST00000412570 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 LY75O60449 1722 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
SMPD4-203ENST00000412570 GOLGA8BA8MQT2 603 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
SMPD4-203ENST00000412570 DALRD3Q5D0E6 543 aaKnown RBP11.49□□□□□ -0.57
SMPD4-203ENST00000412570 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 MKNK2Q9HBH9 465 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 USP40Q9NVE5 1235 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 TACC3Q9Y6A5 838 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 HOXA10P31260 410 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-203ENST00000412570 NFIAQ12857 509 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 UBE3CQ15386 1083 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
SMPD4-203ENST00000412570 TMEM67Q5HYA8 995 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 TDRD7Q8NHU6 1098 aaKnown RBP11.48□□□□□ -0.57
SMPD4-203ENST00000412570 PHKBQ93100 1093 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 PATL2C9JE40 543 aaKnown RBP11.48□□□□□ -0.57
SMPD4-203ENST00000412570 GJB2P29033 226 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 PLCD1P51178 756 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 WDR66Q8TBY9 1149 aa11.48□□□□□ -0.57
SMPD4-203ENST00000412570 CPLX1O14810 134 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 CTNNA3Q9UI47 895 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 TSPY2A6NKD2 308 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 PPARAQ07869 468 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 ZNF526Q8TF50 670 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 ADD1P35611 737 aaKnown RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 CCDC84Q86UT8 332 aaPredicted RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 NCOA7Q8NI08 942 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 TNPO1Q92973 898 aaKnown RBP11.47□□□□□ -0.57
SMPD4-203ENST00000412570 NBPF3Q9H094 633 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
SMPD4-203ENST00000412570 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
SMPD4-203ENST00000412570 MIGA2Q7L4E1 593 aa11.46□□□□□ -0.57
SMPD4-203ENST00000412570 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.57
SMPD4-203ENST00000412570 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
SMPD4-203ENST00000412570 EYA3Q99504 573 aa11.46□□□□□ -0.57
SMPD4-203ENST00000412570 VAT1LQ9HCJ6 419 aa11.46□□□□□ -0.57
SMPD4-203ENST00000412570 YDJCA8MPS7 323 aa11.46□□□□□ -0.58
SMPD4-203ENST00000412570 DHX16O60231 1041 aaKnown RBP11.46□□□□□ -0.58
SMPD4-203ENST00000412570 UBAC1Q9BSL1 405 aa11.46□□□□□ -0.58
SMPD4-203ENST00000412570 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.58
SMPD4-203ENST00000412570 PSMD14O00487 310 aa11.46□□□□□ -0.58
SMPD4-203ENST00000412570 ZYXQ15942 572 aaKnown RBP11.46□□□□□ -0.58
SMPD4-203ENST00000412570 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.58
SMPD4-203ENST00000412570 DHX32Q7L7V1 743 aaKnown RBP11.46□□□□□ -0.58
SMPD4-203ENST00000412570 DSCC1Q9BVC3 393 aa11.46□□□□□ -0.58
SMPD4-203ENST00000412570 CHMP5Q9NZZ3 219 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms