RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 DOCK2Q92608 1830 aa23.13■■□□□ 1.29
TRIM56-202ENST00000412507 APBB1O00213 710 aa23.13■■□□□ 1.29
TRIM56-202ENST00000412507 PPP1R12BO60237 982 aaPredicted RBP23.13■■□□□ 1.29
TRIM56-202ENST00000412507 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
TRIM56-202ENST00000412507 KIF23Q02241 960 aaPredicted RBP23.13■■□□□ 1.29
TRIM56-202ENST00000412507 RHPN1Q8TCX5 695 aa23.13■■□□□ 1.29
TRIM56-202ENST00000412507 SNRKQ9NRH2 765 aa23.13■■□□□ 1.29
TRIM56-202ENST00000412507 CASP8AP2Q9UKL3 1982 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 LAMB1P07942 1786 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 FKBP1CQ5VVH2 108 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 CDC42EP5Q6NZY7 148 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 BEGAINQ9BUH8 593 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 IL1RAPL2Q9NP60 686 aa23.12■■□□□ 1.29
TRIM56-202ENST00000412507 CTCFP49711 727 aaPredicted RBP23.11■■□□□ 1.29
TRIM56-202ENST00000412507 MECOMQ03112 1051 aa23.11■■□□□ 1.29
TRIM56-202ENST00000412507 MAP3K11Q16584 847 aa23.11■■□□□ 1.29
TRIM56-202ENST00000412507 LDLRAD1Q5T700 205 aa23.11■■□□□ 1.29
TRIM56-202ENST00000412507 AACSQ86V21 672 aa23.11■■□□□ 1.29
TRIM56-202ENST00000412507 USP40Q9NVE5 1235 aa23.11■■□□□ 1.29
TRIM56-202ENST00000412507 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.11■■□□□ 1.29
TRIM56-202ENST00000412507 GAKO14976 1311 aa23.1■■□□□ 1.29
TRIM56-202ENST00000412507 USP2O75604 605 aaPredicted RBP23.1■■□□□ 1.29
TRIM56-202ENST00000412507 COL13A1Q5TAT6 717 aaPredicted RBP23.1■■□□□ 1.29
TRIM56-202ENST00000412507 FAM83AQ86UY5 434 aa23.1■■□□□ 1.29
TRIM56-202ENST00000412507 SLF2Q8IX21 1173 aa23.1■■□□□ 1.29
TRIM56-202ENST00000412507 ZNF384Q8TF68 577 aa23.1■■□□□ 1.29
TRIM56-202ENST00000412507 KIF1BPQ96EK5 621 aa23.09■■□□□ 1.29
TRIM56-202ENST00000412507 FAM163AQ96GL9 167 aaPredicted RBP23.09■■□□□ 1.29
TRIM56-202ENST00000412507 ZNF512BQ96KM6 892 aaPredicted RBP23.09■■□□□ 1.29
TRIM56-202ENST00000412507 RAI14Q9P0K7 980 aa23.09■■□□□ 1.29
TRIM56-202ENST00000412507 MROH7-TTC4A0A0A0MT08 1334 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 HSPA8P11142 646 aaKnown RBP23.08■■□□□ 1.29
TRIM56-202ENST00000412507 IREB2P48200 963 aaKnown RBP23.08■■□□□ 1.29
TRIM56-202ENST00000412507 LBX1P52954 281 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 NFIAQ12857 509 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 NSUN4Q96CB9 384 aaKnown RBP23.08■■□□□ 1.29
TRIM56-202ENST00000412507 CLMNQ96JQ2 1002 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 BCL11AQ9H165 835 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 LRP2BPQ9P2M1 347 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 TSKSQ9UJT2 592 aa23.08■■□□□ 1.29
TRIM56-202ENST00000412507 FOCADQ5VW36 1801 aa23.08■■□□□ 1.28
TRIM56-202ENST00000412507 RAB11FIP3O75154 756 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 CYP2E1P05181 493 aaPredicted RBP23.07■■□□□ 1.28
TRIM56-202ENST00000412507 BTDP43251 543 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 ZAP70P43403 619 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 TCP10Q12799 353 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 MKRN3Q13064 507 aaKnown RBP23.07■■□□□ 1.28
TRIM56-202ENST00000412507 FAM151AQ8WW52 585 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 CSRNP1Q96S65 589 aa23.07■■□□□ 1.28
TRIM56-202ENST00000412507 RPAP1Q9BWH6 1393 aaPredicted RBP23.06■■□□□ 1.28
TRIM56-202ENST00000412507 CLASRPQ8N2M8 674 aaKnown RBP23.06■■□□□ 1.28
TRIM56-202ENST00000412507 SLC10A4Q96EP9 437 aa23.06■■□□□ 1.28
TRIM56-202ENST00000412507 FAM198AQ9UFP1 575 aa23.06■■□□□ 1.28
TRIM56-202ENST00000412507 LDHCP07864 332 aa23.05■■□□□ 1.28
TRIM56-202ENST00000412507 GSTO1P78417 241 aa23.05■■□□□ 1.28
TRIM56-202ENST00000412507 MYH7P12883 1935 aa23.05■■□□□ 1.28
TRIM56-202ENST00000412507 GPR75-ASB3A0A0A6YYF3 556 aa23.04■■□□□ 1.28
TRIM56-202ENST00000412507 UNCXA6NJT0 531 aa23.04■■□□□ 1.28
TRIM56-202ENST00000412507 ANKRD13AQ8IZ07 590 aa23.04■■□□□ 1.28
TRIM56-202ENST00000412507 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
TRIM56-202ENST00000412507 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
TRIM56-202ENST00000412507 CA12O43570 354 aa23.03■■□□□ 1.28
TRIM56-202ENST00000412507 IFIT2P09913 472 aaKnown RBP23.03■■□□□ 1.28
TRIM56-202ENST00000412507 RGS3P49796 1198 aa23.03■■□□□ 1.28
TRIM56-202ENST00000412507 SPRYD7Q5W111 196 aa23.03■■□□□ 1.28
TRIM56-202ENST00000412507 ZFPM1Q8IX07 1006 aa23.03■■□□□ 1.28
TRIM56-202ENST00000412507 IDI2Q9BXS1 227 aa23.03■■□□□ 1.28
TRIM56-202ENST00000412507 PIH1D3Q9NQM4 214 aaKnown RBP23.03■■□□□ 1.28
TRIM56-202ENST00000412507 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
TRIM56-202ENST00000412507 REM2Q8IYK8 340 aaPredicted RBP23.02■■□□□ 1.28
TRIM56-202ENST00000412507 HOOK2Q96ED9 719 aa23.02■■□□□ 1.28
TRIM56-202ENST00000412507 WNK4Q96J92 1243 aa23.02■■□□□ 1.28
TRIM56-202ENST00000412507 CRBNQ96SW2 442 aa23.02■■□□□ 1.28
TRIM56-202ENST00000412507 MYH1P12882 1939 aa23.02■■□□□ 1.28
TRIM56-202ENST00000412507 WDHD1O75717 1129 aaPredicted RBP23.01■■□□□ 1.27
TRIM56-202ENST00000412507 RHBDL3P58872 404 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 MAP3K9P80192 1104 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 NAA16Q6N069 864 aaPredicted RBP23.01■■□□□ 1.27
TRIM56-202ENST00000412507 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.01■■□□□ 1.27
TRIM56-202ENST00000412507 MIGA2Q7L4E1 593 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRIM56-202ENST00000412507 ELP3Q9H9T3 547 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 RNF186Q9NXI6 227 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 PCDHB15Q9Y5E8 787 aa23.01■■□□□ 1.27
TRIM56-202ENST00000412507 ENTPD3O75355 529 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 TRPA1O75762 1119 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 PICALMQ13492 652 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 DCAF15Q66K64 600 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 LRRCC1Q9C099 1032 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
TRIM56-202ENST00000412507 DDX4Q9NQI0 724 aaKnown RBP23■■□□□ 1.27
TRIM56-202ENST00000412507 SMARCA5O60264 1052 aaPredicted RBP22.99■■□□□ 1.27
TRIM56-202ENST00000412507 ZBTB48P10074 688 aaPredicted RBP22.99■■□□□ 1.27
TRIM56-202ENST00000412507 DCTPP1Q9H773 170 aa22.99■■□□□ 1.27
TRIM56-202ENST00000412507 ATAD5Q96QE3 1844 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 IDH1O75874 414 aaKnown RBP22.98■■□□□ 1.27
TRIM56-202ENST00000412507 GJA5P36382 358 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 TM4SF4P48230 202 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 VGLL4Q14135 290 aa22.98■■□□□ 1.27
TRIM56-202ENST00000412507 ADGRA1Q86SQ6 560 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms