RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 MOB2Q70IA6 237 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 ARMC9Q7Z3E5 817 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 ZNF384Q8TF68 577 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 TEPSINQ96N21 525 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 RAI14Q9P0K7 980 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 SUPT16HQ9Y5B9 1047 aaKnown RBP25.37■■□□□ 1.65
VSX1-204ENST00000409958 MROH7-TTC4A0A0A0MT08 1334 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 CCDC102AQ96A19 550 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 USP40Q9NVE5 1235 aa25.37■■□□□ 1.65
VSX1-204ENST00000409958 SSC5DA1L4H1 1573 aa25.36■■□□□ 1.65
VSX1-204ENST00000409958 UBE2Q2LH0YL09 131 aa25.36■■□□□ 1.65
VSX1-204ENST00000409958 PPP1R12BO60237 982 aaPredicted RBP25.36■■□□□ 1.65
VSX1-204ENST00000409958 LDHCP07864 332 aa25.36■■□□□ 1.65
VSX1-204ENST00000409958 ZNF157P51786 506 aaPredicted RBP25.36■■□□□ 1.65
VSX1-204ENST00000409958 TMEM39BQ9GZU3 492 aa25.36■■□□□ 1.65
VSX1-204ENST00000409958 MAP2K2P36507 400 aa25.35■■□□□ 1.65
VSX1-204ENST00000409958 PRKG1Q13976 671 aa25.35■■□□□ 1.65
VSX1-204ENST00000409958 MAP3K11Q16584 847 aa25.35■■□□□ 1.65
VSX1-204ENST00000409958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.35■■□□□ 1.65
VSX1-204ENST00000409958 THSD7BQ9C0I4 1608 aa25.35■■□□□ 1.65
VSX1-204ENST00000409958 GPR75-ASB3A0A0A6YYF3 556 aa25.34■■□□□ 1.65
VSX1-204ENST00000409958 BTDP43251 543 aa25.34■■□□□ 1.65
VSX1-204ENST00000409958 BCL11AQ9H165 835 aa25.34■■□□□ 1.65
VSX1-204ENST00000409958 ANGEL1Q9UNK9 670 aaKnown RBP25.34■■□□□ 1.65
VSX1-204ENST00000409958 FAM155AB1AL88 458 aaPredicted RBP25.33■■□□□ 1.64
VSX1-204ENST00000409958 SMARCA5O60264 1052 aaPredicted RBP25.33■■□□□ 1.64
VSX1-204ENST00000409958 AOC2O75106 756 aa25.33■■□□□ 1.64
VSX1-204ENST00000409958 NOGQ13253 232 aa25.33■■□□□ 1.64
VSX1-204ENST00000409958 CDAN1Q8IWY9 1227 aa25.33■■□□□ 1.64
VSX1-204ENST00000409958 FAM151AQ8WW52 585 aa25.33■■□□□ 1.64
VSX1-204ENST00000409958 PIH1D3Q9NQM4 214 aaKnown RBP25.33■■□□□ 1.64
VSX1-204ENST00000409958 RPAP1Q9BWH6 1393 aaPredicted RBP25.32■■□□□ 1.64
VSX1-204ENST00000409958 SLC10A3P09131 477 aa25.32■■□□□ 1.64
VSX1-204ENST00000409958 NFIAQ12857 509 aa25.32■■□□□ 1.64
VSX1-204ENST00000409958 LDLRAD1Q5T700 205 aa25.32■■□□□ 1.64
VSX1-204ENST00000409958 IDI2Q9BXS1 227 aa25.32■■□□□ 1.64
VSX1-204ENST00000409958 MAP4K4O95819 1239 aaPredicted RBP25.31■■□□□ 1.64
VSX1-204ENST00000409958 MAP2K1Q02750 393 aaPredicted RBP25.31■■□□□ 1.64
VSX1-204ENST00000409958 NAA16Q6N069 864 aaPredicted RBP25.31■■□□□ 1.64
VSX1-204ENST00000409958 FAM198AQ9UFP1 575 aa25.31■■□□□ 1.64
VSX1-204ENST00000409958 FZD1Q9UP38 647 aa25.31■■□□□ 1.64
VSX1-204ENST00000409958 UNCXA6NJT0 531 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 RHBDL3P58872 404 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 HDAC1Q13547 482 aaPredicted RBP25.3■■□□□ 1.64
VSX1-204ENST00000409958 RASAL3Q86YV0 1011 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 HOOK2Q96ED9 719 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 WBP1LQ9NX94 342 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 NDUFB9Q9Y6M9 179 aa25.3■■□□□ 1.64
VSX1-204ENST00000409958 MAST2Q6P0Q8 1798 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 USP2O75604 605 aaPredicted RBP25.29■■□□□ 1.64
VSX1-204ENST00000409958 ATP5JP18859 108 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 IREB2P48200 963 aaKnown RBP25.29■■□□□ 1.64
VSX1-204ENST00000409958 TCP10Q12799 353 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 TTF1Q15361 905 aaPredicted RBP25.29■■□□□ 1.64
VSX1-204ENST00000409958 EXOC6Q8TAG9 804 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 ANTXR1Q9H6X2 564 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 RFX7Q2KHR2 1363 aa25.29■■□□□ 1.64
VSX1-204ENST00000409958 ENTPD3O75355 529 aa25.28■■□□□ 1.64
VSX1-204ENST00000409958 IDH1O75874 414 aaKnown RBP25.28■■□□□ 1.64
VSX1-204ENST00000409958 TMED8Q6PL24 325 aaPredicted RBP25.28■■□□□ 1.64
VSX1-204ENST00000409958 MYO5AQ9Y4I1 1855 aaKnown RBP25.28■■□□□ 1.64
VSX1-204ENST00000409958 FOXN1O15353 648 aa25.27■■□□□ 1.64
VSX1-204ENST00000409958 WDHD1O75717 1129 aaPredicted RBP25.27■■□□□ 1.64
VSX1-204ENST00000409958 RGS3P49796 1198 aa25.27■■□□□ 1.64
VSX1-204ENST00000409958 MAP3K12Q12852 859 aa25.27■■□□□ 1.64
VSX1-204ENST00000409958 NOL10Q9BSC4 688 aaKnown RBP25.27■■□□□ 1.64
VSX1-204ENST00000409958 NPM3O75607 178 aaKnown RBP25.26■■□□□ 1.63
VSX1-204ENST00000409958 BAG3O95817 575 aa25.26■■□□□ 1.63
VSX1-204ENST00000409958 ZIC5Q96T25 663 aa25.26■■□□□ 1.63
VSX1-204ENST00000409958 DNAJC2Q99543 621 aaKnown RBP25.26■■□□□ 1.63
VSX1-204ENST00000409958 PPP4CP60510 307 aa25.25■■□□□ 1.63
VSX1-204ENST00000409958 ANKRD13AQ8IZ07 590 aa25.25■■□□□ 1.63
VSX1-204ENST00000409958 AIDAQ96BJ3 306 aa25.25■■□□□ 1.63
VSX1-204ENST00000409958 GCC1Q96CN9 775 aa25.25■■□□□ 1.63
VSX1-204ENST00000409958 BOLA2Q9H3K6 86 aa25.25■■□□□ 1.63
VSX1-204ENST00000409958 DOCK2Q92608 1830 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 PLCG2P16885 1265 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 CYP7A1P22680 504 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 KIF23Q02241 960 aaPredicted RBP25.24■■□□□ 1.63
VSX1-204ENST00000409958 DCAF15Q66K64 600 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 ADGRA1Q86SQ6 560 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 ZFPM1Q8IX07 1006 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 SLC10A4Q96EP9 437 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 HAUS7Q99871 368 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 DDX4Q9NQI0 724 aaKnown RBP25.24■■□□□ 1.63
VSX1-204ENST00000409958 ECHDC1Q9NTX5 307 aa25.24■■□□□ 1.63
VSX1-204ENST00000409958 GOLIM4O00461 696 aa25.23■■□□□ 1.63
VSX1-204ENST00000409958 MAGEB6Q8N7X4 407 aa25.23■■□□□ 1.63
VSX1-204ENST00000409958 GPATCH3Q96I76 525 aa25.23■■□□□ 1.63
VSX1-204ENST00000409958 CLMNQ96JQ2 1002 aa25.23■■□□□ 1.63
VSX1-204ENST00000409958 AATFQ9NY61 560 aaKnown RBP eCLIP25.23■■□□□ 1.63
VSX1-204ENST00000409958 PICALMQ13492 652 aa25.22■■□□□ 1.63
VSX1-204ENST00000409958 TEX11Q8IYF3 940 aa25.22■■□□□ 1.63
VSX1-204ENST00000409958 REM2Q8IYK8 340 aaPredicted RBP25.22■■□□□ 1.63
VSX1-204ENST00000409958 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.22■■□□□ 1.63
VSX1-204ENST00000409958 BEGAINQ9BUH8 593 aa25.22■■□□□ 1.63
VSX1-204ENST00000409958 PAG1Q9NWQ8 432 aa25.22■■□□□ 1.63
VSX1-204ENST00000409958 AK9Q5TCS8 1911 aa25.21■■□□□ 1.63
VSX1-204ENST00000409958 MAP3K9P80192 1104 aa25.21■■□□□ 1.63
VSX1-204ENST00000409958 SH3RF3Q8TEJ3 882 aaPredicted RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms