RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 GPR75-ASB3A0A0A6YYF3 556 aa15.05■□□□□ 0
PMS1-204ENST00000409823 GSG1L2A8MUP6 293 aa15.05■□□□□ 0
PMS1-204ENST00000409823 BAG3O95817 575 aa15.05■□□□□ 0
PMS1-204ENST00000409823 SLF2Q8IX21 1173 aa15.05■□□□□ 0
PMS1-204ENST00000409823 TGFBRAP1Q8WUH2 860 aa15.05■□□□□ 0
PMS1-204ENST00000409823 PRMT6Q96LA8 375 aaPredicted RBP15.05■□□□□ 0
PMS1-204ENST00000409823 TBC1D32Q96NH3 1257 aa15.05■□□□□ 0
PMS1-204ENST00000409823 SCAF8Q9UPN6 1271 aaKnown RBP15.05■□□□□ 0
PMS1-204ENST00000409823 MYH2Q9UKX2 1941 aa15.05■□□□□ 0
PMS1-204ENST00000409823 MYO3BQ8WXR4 1341 aa15.05■□□□□ -0
PMS1-204ENST00000409823 SMIM22K7EJ46 135 aa15.05■□□□□ -0
PMS1-204ENST00000409823 AGBL3Q8NEM8 1001 aa15.05■□□□□ -0
PMS1-204ENST00000409823 SBF1O95248 1867 aa15.05■□□□□ -0
PMS1-204ENST00000409823 GAKO14976 1311 aa15.05■□□□□ -0
PMS1-204ENST00000409823 EVX2Q03828 476 aa15.04■□□□□ -0
PMS1-204ENST00000409823 PICALMQ13492 652 aa15.04■□□□□ -0
PMS1-204ENST00000409823 SAMD7Q7Z3H4 446 aa15.04■□□□□ -0
PMS1-204ENST00000409823 MICALL2Q8IY33 904 aa15.04■□□□□ -0
PMS1-204ENST00000409823 RASEFQ8IZ41 740 aa15.04■□□□□ -0
PMS1-204ENST00000409823 USP40Q9NVE5 1235 aa15.04■□□□□ -0
PMS1-204ENST00000409823 ZNF646O15015 1829 aaPredicted RBP15.04■□□□□ -0
PMS1-204ENST00000409823 PATL2C9JE40 543 aaKnown RBP15.04■□□□□ -0
PMS1-204ENST00000409823 TDO2P48775 406 aa15.04■□□□□ -0
PMS1-204ENST00000409823 RHBDL3P58872 404 aa15.04■□□□□ -0
PMS1-204ENST00000409823 HHIPL2Q6UWX4 724 aa15.04■□□□□ -0
PMS1-204ENST00000409823 MAPKAPK5Q8IW41 473 aa15.04■□□□□ -0
PMS1-204ENST00000409823 IFNL3Q8IZI9 196 aa15.04■□□□□ -0
PMS1-204ENST00000409823 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
PMS1-204ENST00000409823 TDRD3Q9H7E2 651 aaKnown RBP15.04■□□□□ -0
PMS1-204ENST00000409823 CNOT7Q9UIV1 285 aaKnown RBP15.04■□□□□ -0
PMS1-204ENST00000409823 SERPINA10Q9UK55 444 aa15.04■□□□□ -0
PMS1-204ENST00000409823 CYP2D7A0A087X1C5 515 aa15.03■□□□□ -0
PMS1-204ENST00000409823 USP5P45974 858 aa15.03■□□□□ -0
PMS1-204ENST00000409823 CDC42EP5Q6NZY7 148 aa15.03■□□□□ -0
PMS1-204ENST00000409823 TEX11Q8IYF3 940 aa15.03■□□□□ -0
PMS1-204ENST00000409823 ZDHHC15Q96MV8 337 aa15.03■□□□□ -0
PMS1-204ENST00000409823 DSCC1Q9BVC3 393 aa15.03■□□□□ -0
PMS1-204ENST00000409823 CRNKL1Q9BZJ0 848 aaKnown RBP15.03■□□□□ -0
PMS1-204ENST00000409823 HDAC9Q9UKV0 1011 aa15.03■□□□□ -0
PMS1-204ENST00000409823 CLRN2A0PK11 232 aa15.03■□□□□ -0
PMS1-204ENST00000409823 NECTIN1Q15223 517 aa15.03■□□□□ -0
PMS1-204ENST00000409823 TBC1D10BQ4KMP7 808 aaPredicted RBP15.03■□□□□ -0
PMS1-204ENST00000409823 NAPBQ9H115 298 aa15.03■□□□□ -0
PMS1-204ENST00000409823 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
PMS1-204ENST00000409823 HSPA4P34932 840 aa15.02■□□□□ -0
PMS1-204ENST00000409823 NFIAQ12857 509 aa15.02■□□□□ -0
PMS1-204ENST00000409823 DLGAP5Q15398 846 aa15.02■□□□□ -0
PMS1-204ENST00000409823 NBPF9Q3BBW0 867 aa15.02■□□□□ -0
PMS1-204ENST00000409823 CREB3L3Q68CJ9 461 aa15.02■□□□□ -0
PMS1-204ENST00000409823 GPC2Q8N158 579 aa15.02■□□□□ -0
PMS1-204ENST00000409823 MYOZ2Q9NPC6 264 aa15.02■□□□□ -0
PMS1-204ENST00000409823 RBM19Q9Y4C8 960 aaKnown RBP15.02■□□□□ -0
PMS1-204ENST00000409823 MINDY4BA8MYZ0 360 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 CYP21A2P08686 494 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 PPP4CP60510 307 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 TCP10Q12799 353 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 COL9A3Q14050 684 aaPredicted RBP15.02□□□□□ -0.01
PMS1-204ENST00000409823 DCP1AQ9NPI6 582 aaPredicted RBP15.02□□□□□ -0.01
PMS1-204ENST00000409823 SLC27A2O14975 620 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 GNAT2P19087 354 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 EPS15P42566 896 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 INCENPQ9NQS7 918 aa15.02□□□□□ -0.01
PMS1-204ENST00000409823 MAST2Q6P0Q8 1798 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 SPDYE2BA6NHP3 402 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 SPDYE6P0CI01 402 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 NACAP1Q9BZK3 213 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
PMS1-204ENST00000409823 MCM9Q9NXL9 1143 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 U3KPZ7 1027 aaPredicted RBP15.01□□□□□ -0.01
PMS1-204ENST00000409823 CYP2D6P10635 497 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 MCCP23508 829 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 RBM25P49756 843 aaKnown RBP15.01□□□□□ -0.01
PMS1-204ENST00000409823 ADCK5Q3MIX3 580 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 SNX14Q9Y5W7 946 aa15.01□□□□□ -0.01
PMS1-204ENST00000409823 ASTN2O75129 1339 aaPredicted RBP15.01□□□□□ -0.01
PMS1-204ENST00000409823 PSME4Q14997 1843 aa15□□□□□ -0.01
PMS1-204ENST00000409823 USP17L12C9JPN9 530 aa15□□□□□ -0.01
PMS1-204ENST00000409823 USP17L21D6R901 530 aa15□□□□□ -0.01
PMS1-204ENST00000409823 WNT10BO00744 389 aa15□□□□□ -0.01
PMS1-204ENST00000409823 WDHD1O75717 1129 aaPredicted RBP15□□□□□ -0.01
PMS1-204ENST00000409823 RPS12P25398 132 aaKnown RBP15□□□□□ -0.01
PMS1-204ENST00000409823 HDLBPQ00341 1268 aaKnown RBP15□□□□□ -0.01
PMS1-204ENST00000409823 CTDSPL2Q05D32 466 aa15□□□□□ -0.01
PMS1-204ENST00000409823 KIF2CQ99661 725 aa15□□□□□ -0.01
PMS1-204ENST00000409823 VEZTQ9HBM0 779 aa15□□□□□ -0.01
PMS1-204ENST00000409823 EIF5BO60841 1220 aaKnown RBP15□□□□□ -0.01
PMS1-204ENST00000409823 CPA1P15085 419 aa15□□□□□ -0.01
PMS1-204ENST00000409823 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
PMS1-204ENST00000409823 FLT1P17948 1338 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 TCP10L2B9ZVM9 353 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 ZNF213O14771 459 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 DPY19L2Q6NUT2 758 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 TMED8Q6PL24 325 aaPredicted RBP14.99□□□□□ -0.01
PMS1-204ENST00000409823 DPF2Q92785 391 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 MRIQ9BWK5 157 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
PMS1-204ENST00000409823 GPRC5DQ9NZD1 345 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 PLCG2P16885 1265 aa14.99□□□□□ -0.01
PMS1-204ENST00000409823 IMMTQ16891 758 aaKnown RBP14.99□□□□□ -0.01
PMS1-204ENST00000409823 CTR9Q6PD62 1173 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms