RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 SAPCD2Q86UD0 394 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 FAM83AQ86UY5 434 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 NSUN4Q96CB9 384 aaKnown RBP13.28□□□□□ -0.28
CHMP3-205ENST00000409810 HHIPL1Q96JK4 782 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 AOX1Q06278 1338 aa13.28□□□□□ -0.28
CHMP3-205ENST00000409810 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-205ENST00000409810 MAP4K4O95819 1239 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-205ENST00000409810 ATP5JP18859 108 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 BTDP43251 543 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 HUNKP57058 714 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 MAP3K12Q12852 859 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 CDC42EP5Q6NZY7 148 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 DLK2Q6UY11 383 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 ARMC9Q7Z3E5 817 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 DNAJC5GQ8N7S2 189 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 HOOK2Q96ED9 719 aa13.27□□□□□ -0.29
CHMP3-205ENST00000409810 DNAJC2Q99543 621 aaKnown RBP13.27□□□□□ -0.29
CHMP3-205ENST00000409810 RPAP1Q9BWH6 1393 aaPredicted RBP13.27□□□□□ -0.29
CHMP3-205ENST00000409810 GPR75-ASB3A0A0A6YYF3 556 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 IDH1O75874 414 aaKnown RBP13.26□□□□□ -0.29
CHMP3-205ENST00000409810 BAG3O95817 575 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 PLCG2P16885 1265 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 PRAMEF18Q5VWM3 479 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 PIH1D3Q9NQM4 214 aaKnown RBP13.26□□□□□ -0.29
CHMP3-205ENST00000409810 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
CHMP3-205ENST00000409810 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 FOCADQ5VW36 1801 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 ERC2O15083 957 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 CACNB3P54284 484 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 IRX6P78412 446 aaPredicted RBP13.25□□□□□ -0.29
CHMP3-205ENST00000409810 ANKRD45Q5TZF3 282 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 CERS3Q8IU89 383 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 HAUS7Q99871 368 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 BOLA2Q9H3K6 86 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
CHMP3-205ENST00000409810 GOLIM4O00461 696 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 RGMBQ6NW40 437 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 ZNF384Q8TF68 577 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 FAM151AQ8WW52 585 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 CAPNS2Q96L46 248 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHMP3-205ENST00000409810 TMEM39BQ9GZU3 492 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 ANTXR1Q9H6X2 564 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 ANGEL1Q9UNK9 670 aaKnown RBP13.24□□□□□ -0.29
CHMP3-205ENST00000409810 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 THSD7BQ9C0I4 1608 aa13.24□□□□□ -0.29
CHMP3-205ENST00000409810 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
CHMP3-205ENST00000409810 ENTPD3O75355 529 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 CYP7A1P22680 504 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 IREB2P48200 963 aaKnown RBP13.23□□□□□ -0.29
CHMP3-205ENST00000409810 VEGFBP49765 207 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 NBPF12Q5TAG4 269 aaPredicted RBP13.23□□□□□ -0.29
CHMP3-205ENST00000409810 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 CYP4F22Q6NT55 531 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 CCDC102AQ96A19 550 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 AATFQ9NY61 560 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHMP3-205ENST00000409810 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
CHMP3-205ENST00000409810 RFX7Q2KHR2 1363 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 UNCXA6NJT0 531 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
CHMP3-205ENST00000409810 GLRX3O76003 335 aaKnown RBP13.22□□□□□ -0.29
CHMP3-205ENST00000409810 CENPBP07199 599 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-205ENST00000409810 MX1P20591 662 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
CHMP3-205ENST00000409810 RHBDL3P58872 404 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 PPP4CP60510 307 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 TCP10Q12799 353 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 NFIAQ12857 509 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 GRM1Q13255 1194 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 PRKG1Q13976 671 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 TEX11Q8IYF3 940 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 JMYQ8N9B5 988 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 TEPSINQ96N21 525 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 PCNTO95613 3336 aa13.22□□□□□ -0.29
CHMP3-205ENST00000409810 MYH1P12882 1939 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 WDHD1O75717 1129 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-205ENST00000409810 RGS3P49796 1198 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 NOGQ13253 232 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 PICALMQ13492 652 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 LRRFIP1Q32MZ4 808 aaKnown RBP13.21□□□□□ -0.29
CHMP3-205ENST00000409810 SLC9C2Q5TAH2 1124 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 ZSCAN25Q6NSZ9 544 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.29
CHMP3-205ENST00000409810 FAM198AQ9UFP1 575 aa13.21□□□□□ -0.29
CHMP3-205ENST00000409810 COL2A1P02458 1487 aaPredicted RBP13.21□□□□□ -0.3
CHMP3-205ENST00000409810 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 IGHDP01880 384 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 SLC10A3P09131 477 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 PDE6AP16499 860 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 MAP2K2P36507 400 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 MOB2Q70IA6 237 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 ANKRD13AQ8IZ07 590 aa13.2□□□□□ -0.3
CHMP3-205ENST00000409810 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms