RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 STK3Q13188 491 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 NAT10Q9H0A0 1025 aaKnown RBP8.62□□□□□ -1.03
SH3D19-203ENST00000409598 KCNG1Q9UIX4 513 aa8.62□□□□□ -1.03
SH3D19-203ENST00000409598 CCDC85CA6NKD9 419 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MBD4O95243 580 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 CALML3P27482 149 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 BTDP43251 543 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 SNAPC2Q13487 334 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MCMDC2Q4G0Z9 681 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MCTP2Q6DN12 878 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 DPF3Q92784 378 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 TSG101Q99816 390 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 PYM1Q9BRP8 204 aaKnown RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 RABEP1Q15276 862 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 FILIP1LQ4L180 1135 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 FRMPD1Q5SYB0 1578 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 CETPP11597 493 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MRE11P49959 708 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 SKOR2Q2VWA4 1001 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 IL17REQ8NFR9 667 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 ERO1AQ96HE7 468 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MYCLP12524 364 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 TMED8Q6PL24 325 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 CDAN1Q8IWY9 1227 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 REM2Q8IYK8 340 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 SYCP3Q8IZU3 236 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 FBXO40Q9UH90 709 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 MRPL11Q9Y3B7 192 aaKnown RBP8.61□□□□□ -1.03
SH3D19-203ENST00000409598 ATP10DQ9P241 1426 aa8.61□□□□□ -1.03
SH3D19-203ENST00000409598 ASNSP08243 561 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 NUCB2P80303 420 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 ICA1Q05084 483 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 FOXP4Q8IVH2 680 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 LUC7LQ9NQ29 371 aaKnown RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 ZHX1Q9UKY1 873 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 ABCA6Q8N139 1617 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 TECPR2O15040 1411 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 NEURL1BA8MQ27 555 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 KINO60870 393 aaKnown RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 HMGN5P82970 282 aaKnown RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 NLRP10Q86W26 655 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 LZTS2Q9BRK4 669 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 METAP2P50579 478 aaKnown RBP eCLIP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 FCGRTP55899 365 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 SP4Q02446 784 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 TBC1D9BQ66K14 1250 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 UBA5Q9GZZ9 404 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 GBA2Q9HCG7 927 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 USP31Q70CQ4 1352 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 MST1RQ04912 1400 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 PRC1O43663 620 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 DEFB115Q30KQ5 88 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 CCDC82Q8N4S0 544 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 WRNIP1Q96S55 665 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 RBM28Q9NW13 759 aaKnown RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 CPDO75976 1380 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 CHADLQ6NUI6 762 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 SASS6Q6UVJ0 657 aa8.6□□□□□ -1.03
SH3D19-203ENST00000409598 COL23A1Q86Y22 540 aaPredicted RBP8.6□□□□□ -1.03
SH3D19-203ENST00000409598 FGFR1OPO95684 399 aaKnown RBP8.59□□□□□ -1.03
SH3D19-203ENST00000409598 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
SH3D19-203ENST00000409598 RTN1Q16799 776 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 GLG1Q92896 1179 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 FTOQ9C0B1 505 aaKnown RBP eCLIP8.59□□□□□ -1.03
SH3D19-203ENST00000409598 GPCPD1Q9NPB8 672 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 HOXC10Q9NYD6 342 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 PI4KBQ9UBF8 816 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 POTEB2H3BUK9 544 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 BMP15O95972 392 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 HAND2P61296 217 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 MRPL50Q8N5N7 158 aaKnown RBP8.59□□□□□ -1.03
SH3D19-203ENST00000409598 RTEL1Q9NZ71 1219 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 AXIN2Q9Y2T1 843 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 DDX49Q9Y6V7 483 aaKnown RBP8.59□□□□□ -1.03
SH3D19-203ENST00000409598 ZBTB43O43298 467 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 TMOD1P28289 359 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 GYG1P46976 350 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 TXLNBQ8N3L3 684 aa8.59□□□□□ -1.03
SH3D19-203ENST00000409598 TRIM75PA6NK02 468 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 ALAS1P13196 640 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 CCDC173Q0VFZ6 552 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 ARHGEF16Q5VV41 709 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 CHST3Q7LGC8 479 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 ZMYND15Q9H091 742 aa8.59□□□□□ -1.04
SH3D19-203ENST00000409598 IMPG2Q9BZV3 1241 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 GINS2Q9Y248 185 aa8.58□□□□□ -1.04
SH3D19-203ENST00000409598 RBM46Q8TBY0 533 aaKnown RBP8.58□□□□□ -1.04
SH3D19-203ENST00000409598 OTUD5Q96G74 571 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms