RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PTF1AQ7RTS3 328 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 SMARCE1Q969G3 411 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
LIMS2-205ENST00000409455 UBXN6Q9BZV1 441 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
LIMS2-205ENST00000409455 NLRP12P59046 1061 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 FANCCQ00597 558 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 FAM182BQ5T319 152 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 DHX32Q7L7V1 743 aaKnown RBP17.81■□□□□ 0.44
LIMS2-205ENST00000409455 COPRSQ9NQ92 184 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 PARP3Q9Y6F1 533 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 AFF2P51816 1311 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 ZSCAN12O43309 604 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 CRKLP46109 303 aaKnown RBP17.81■□□□□ 0.44
LIMS2-205ENST00000409455 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
LIMS2-205ENST00000409455 ST5P78524 1137 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 APOBRQ0VD83 1088 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 SMC1AQ14683 1233 aaKnown RBP17.81■□□□□ 0.44
LIMS2-205ENST00000409455 ILDR1Q86SU0 546 aaPredicted RBP17.81■□□□□ 0.44
LIMS2-205ENST00000409455 KCNG4Q8TDN1 519 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
LIMS2-205ENST00000409455 BIN1O00499 593 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 TBC1D8O95759 1140 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 GPTP24298 496 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 LMOD1P29536 600 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 STK38Q15208 465 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CC2D1AQ6P1N0 951 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CCDC129Q6ZRS4 1044 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 GPR161Q8N6U8 529 aaKnown RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 SMARCC1Q92922 1105 aaPredicted RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CBFA2T2O43439 604 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 NCAPHQ15003 741 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 ZSCAN26Q16670 478 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 MCMDC2Q4G0Z9 681 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 AK7Q96M32 723 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 CCDC87Q9NVE4 849 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 SALL1Q9NSC2 1324 aa17.8■□□□□ 0.44
LIMS2-205ENST00000409455 IKBKBO14920 756 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
LIMS2-205ENST00000409455 FCHSD1Q86WN1 690 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 SASH3O75995 380 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 ATP5JP18859 108 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 TNNT3P45378 269 aaPredicted RBP17.79■□□□□ 0.44
LIMS2-205ENST00000409455 LINC00301Q8NCQ3 95 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 MPHOSPH8Q99549 860 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 UTP14AQ9BVJ6 771 aaKnown RBP17.79■□□□□ 0.44
LIMS2-205ENST00000409455 RASSF4Q9H2L5 321 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 ZNF609O15014 1411 aa17.79■□□□□ 0.44
LIMS2-205ENST00000409455 GNL2Q13823 731 aaKnown RBP17.78■□□□□ 0.44
LIMS2-205ENST00000409455 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
LIMS2-205ENST00000409455 SEC62Q99442 399 aaKnown RBP17.78■□□□□ 0.44
LIMS2-205ENST00000409455 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
LIMS2-205ENST00000409455 TJP1Q07157 1748 aa17.78■□□□□ 0.44
LIMS2-205ENST00000409455 SERPINC1P01008 464 aa17.78■□□□□ 0.44
LIMS2-205ENST00000409455 UBASH3AP57075 661 aa17.78■□□□□ 0.44
LIMS2-205ENST00000409455 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
LIMS2-205ENST00000409455 FANCGO15287 622 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 KCNQ4P56696 695 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 REXO1L1PQ8IX06 675 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 SYNE4Q8N205 404 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 TMX1Q9H3N1 280 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 ZCCHC17Q9NP64 241 aaKnown RBP17.77■□□□□ 0.44
LIMS2-205ENST00000409455 NEDD4P46934 1319 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
LIMS2-205ENST00000409455 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 PPFIA3O75145 1194 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 YEATS4O95619 227 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 PCCAP05165 728 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-205ENST00000409455 CASQ1P31415 396 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 CFAP100Q494V2 611 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 HSP90AB3PQ58FF7 597 aa17.77■□□□□ 0.44
LIMS2-205ENST00000409455 ZBTB38Q8NAP3 1195 aaPredicted RBP17.77■□□□□ 0.44
LIMS2-205ENST00000409455 GOLGA6L9A6NEM1 432 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 SPTLC2O15270 562 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 ZNF202O95125 648 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 ATP1A3P13637 1013 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 POLR3EQ9NVU0 708 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 ARHGAP6O43182 974 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 PPP2R3AQ06190 1150 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 FAM177A1Q8N128 213 aaPredicted RBP17.76■□□□□ 0.43
LIMS2-205ENST00000409455 GOLGA5Q8TBA6 731 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 AGXT2Q9BYV1 514 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 DBNLQ9UJU6 430 aaKnown RBP17.76■□□□□ 0.43
LIMS2-205ENST00000409455 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
LIMS2-205ENST00000409455 TOP1P11387 765 aaKnown RBP17.75■□□□□ 0.43
LIMS2-205ENST00000409455 TFCP2Q12800 502 aa17.75■□□□□ 0.43
LIMS2-205ENST00000409455 EPC1Q9H2F5 836 aa17.75■□□□□ 0.43
LIMS2-205ENST00000409455 TRPC5Q9UL62 973 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-205ENST00000409455 VWA3AA6NCI4 1184 aa17.75■□□□□ 0.43
LIMS2-205ENST00000409455 EXOC4Q96A65 974 aa17.75■□□□□ 0.43
LIMS2-205ENST00000409455 ZNF274Q96GC6 653 aaPredicted RBP17.75■□□□□ 0.43
LIMS2-205ENST00000409455 PPP2R2CQ9Y2T4 447 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms