RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CIAPIN1Q6FI81 312 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 RASEFQ8IZ41 740 aa20.12■□□□□ 0.81
SSB-202ENST00000409333 FAM163AQ96GL9 167 aaPredicted RBP20.12■□□□□ 0.81
SSB-202ENST00000409333 ZBTB12Q9Y330 459 aaPredicted RBP20.12■□□□□ 0.81
SSB-202ENST00000409333 GPR75-ASB3A0A0A6YYF3 556 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 GSG1L2A8MUP6 293 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 PATL2C9JE40 543 aaKnown RBP20.11■□□□□ 0.81
SSB-202ENST00000409333 FZD9O00144 591 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 SLC27A2O14975 620 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 FGAP02671 866 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 GNAT2P19087 354 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 PPP4CP60510 307 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 SH3RF3Q8TEJ3 882 aaPredicted RBP20.11■□□□□ 0.81
SSB-202ENST00000409333 TEKT1Q969V4 418 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 GMLQ99445 158 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 NOL10Q9BSC4 688 aaKnown RBP20.11■□□□□ 0.81
SSB-202ENST00000409333 SNX14Q9Y5W7 946 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 TAF6LQ9Y6J9 622 aa20.11■□□□□ 0.81
SSB-202ENST00000409333 BAG3O95817 575 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 CRKP46108 304 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 GPR162Q16538 588 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 HHIPL2Q6UWX4 724 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 IFNL3Q8IZI9 196 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 KCNB2Q92953 911 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 PCDHAC2Q9Y5I4 1007 aa20.1■□□□□ 0.81
SSB-202ENST00000409333 ZNF541Q9H0D2 1346 aa20.09■□□□□ 0.81
SSB-202ENST00000409333 CYP21A2P08686 494 aa20.09■□□□□ 0.81
SSB-202ENST00000409333 ANAPC15P60006 121 aa20.09■□□□□ 0.81
SSB-202ENST00000409333 CRNKL1Q9BZJ0 848 aaKnown RBP20.09■□□□□ 0.81
SSB-202ENST00000409333 ZMYM6O95789 1325 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.8
SSB-202ENST00000409333 RHBDL3P58872 404 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 HDLBPQ00341 1268 aaKnown RBP20.08■□□□□ 0.8
SSB-202ENST00000409333 TNIP1Q15025 636 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 RNF20Q5VTR2 975 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 AGBL3Q8NEM8 1001 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 IL17RAQ96F46 866 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 NAPBQ9H115 298 aa20.08■□□□□ 0.8
SSB-202ENST00000409333 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.8
SSB-202ENST00000409333 TDO2P48775 406 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 HAND2P61296 217 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 ALX1Q15699 326 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 APOBEC3HQ6NTF7 200 aaKnown RBP20.07■□□□□ 0.8
SSB-202ENST00000409333 ZDHHC15Q96MV8 337 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 MRIQ9BWK5 157 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 CTNNA3Q9UI47 895 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 SERPINA10Q9UK55 444 aa20.07■□□□□ 0.8
SSB-202ENST00000409333 MYH8P13535 1937 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 ZKSCAN1P17029 563 aaPredicted RBP20.06■□□□□ 0.8
SSB-202ENST00000409333 RBM5P52756 815 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSB-202ENST00000409333 ADCK5Q3MIX3 580 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 NACAP1Q9BZK3 213 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 RNF181Q9P0P0 153 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
SSB-202ENST00000409333 IMMTQ16891 758 aaKnown RBP20.06■□□□□ 0.8
SSB-202ENST00000409333 CERS3Q8IU89 383 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 DCP1AQ9NPI6 582 aaPredicted RBP20.06■□□□□ 0.8
SSB-202ENST00000409333 GJA3Q9Y6H8 435 aa20.06■□□□□ 0.8
SSB-202ENST00000409333 USP17L8P0C7I0 530 aa20.05■□□□□ 0.8
SSB-202ENST00000409333 PLCG2P16885 1265 aa20.05■□□□□ 0.8
SSB-202ENST00000409333 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
SSB-202ENST00000409333 TEX11Q8IYF3 940 aa20.05■□□□□ 0.8
SSB-202ENST00000409333 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
SSB-202ENST00000409333 SHTN1A0MZ66 631 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 USP5P45974 858 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 CDC42EP5Q6NZY7 148 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 NBPF3Q9H094 633 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 ATP8A2Q9NTI2 1148 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
SSB-202ENST00000409333 ZNF213O14771 459 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 GMPSP49915 693 aaPredicted RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 RABEP1Q15276 862 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 TSGA10IPQ3SY00 556 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 GIMAP6Q6P9H5 292 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 OGFOD1Q8N543 542 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 JAKMIP1Q96N16 626 aaKnown RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 MKRN1Q9UHC7 482 aaKnown RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 RPS12P25398 132 aaKnown RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 C9orf131Q5VYM1 1079 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 MAPKAPK5Q8IW41 473 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
SSB-202ENST00000409333 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
SSB-202ENST00000409333 SIPA1L1O43166 1804 aa20.02■□□□□ 0.8
SSB-202ENST00000409333 CYP2D7A0A087X1C5 515 aa20.02■□□□□ 0.8
SSB-202ENST00000409333 SMIM22K7EJ46 135 aa20.02■□□□□ 0.8
SSB-202ENST00000409333 CTR9Q6PD62 1173 aa20.02■□□□□ 0.8
SSB-202ENST00000409333 TBC1D10CQ8IV04 446 aa20.02■□□□□ 0.8
SSB-202ENST00000409333 PRMT6Q96LA8 375 aaPredicted RBP20.02■□□□□ 0.8
SSB-202ENST00000409333 FLT1P17948 1338 aa20.02■□□□□ 0.79
SSB-202ENST00000409333 USP17L12C9JPN9 530 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 USP17L21D6R901 530 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 E7EWF7 191 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 GRIN3BO60391 1043 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 WDHD1O75717 1129 aaPredicted RBP20.01■□□□□ 0.79
SSB-202ENST00000409333 CPA1P15085 419 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 CASTP20810 708 aaKnown RBP20.01■□□□□ 0.79
SSB-202ENST00000409333 EVX2Q03828 476 aa20.01■□□□□ 0.79
SSB-202ENST00000409333 CTDSPL2Q05D32 466 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms