RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 OTUD7BQ6GQQ9 843 aa11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 COL25A1Q9BXS0 654 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 IQSEC3Q9UPP2 1182 aaPredicted RBP11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 PTPRCP08575 1304 aa11.52□□□□□ -0.57
NIF3L1-203ENST00000409129 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 TCP10L2B9ZVM9 353 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 FRAT2O75474 233 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 PDE8BO95263 885 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 TNNI2P48788 182 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 NUBP1P53384 320 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 CHAF1AQ13111 956 aaPredicted RBP11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 MTFR1Q15390 333 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 GRIK5Q16478 980 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 TBC1D22AQ8WUA7 517 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 TEPSINQ96N21 525 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 USP44Q9H0E7 712 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 EYSQ5T1H1 3165 aa11.51□□□□□ -0.57
NIF3L1-203ENST00000409129 E9PSI1 815 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 BCAMP50895 628 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 EVX2Q03828 476 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 Q7L0L9 218 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 NBPF11Q86T75 865 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 VGLL2Q8N8G2 317 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 KLHDC4Q8TBB5 520 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 SSH1Q8WYL5 1049 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 OPTNQ96CV9 577 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 MRIQ9BWK5 157 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 TMEM39BQ9GZU3 492 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 ELP3Q9H9T3 547 aa11.5□□□□□ -0.57
NIF3L1-203ENST00000409129 MAP3K9P80192 1104 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 SLFN5Q08AF3 891 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 CDAN1Q8IWY9 1227 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 TEKT1Q969V4 418 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 MS4A4AQ96JQ5 239 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
NIF3L1-203ENST00000409129 SPTBN5Q9NRC6 3674 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 IFIT1P09914 478 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 FGFR2P21802 821 aa11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 ZDHHC15Q96MV8 337 aa11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 SUGT1Q9Y2Z0 365 aa11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
NIF3L1-203ENST00000409129 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 EYA2O00167 538 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 ZBTB7BO15156 539 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 RFX5P48382 616 aaPredicted RBP11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 GTF2A2P52657 109 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 CACNB3P54284 484 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 VGLL4Q14135 290 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 PUM3Q15397 648 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 UBE2Q1Q7Z7E8 422 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 FAM83AQ86UY5 434 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 BRI3BPQ8WY22 251 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 CSADQ9Y600 493 aa11.47□□□□□ -0.57
NIF3L1-203ENST00000409129 MAST3O60307 1309 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 CCL15-CCL14A0A0B4J2E2 113 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 TAF1CQ15572 869 aaPredicted RBP11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 CCL15Q16663 113 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 FKBP1CQ5VVH2 108 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 FAM43AQ8N2R8 423 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 LPIN2Q92539 896 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 HOOK2Q96ED9 719 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 TMOD2Q9NZR1 351 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 STAP2Q9UGK3 403 aa11.46□□□□□ -0.57
NIF3L1-203ENST00000409129 SLC5A1P13866 664 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 CTGFP29279 349 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 ATG9AQ7Z3C6 839 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 DEFB123Q8N688 67 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 CDCA7LQ96GN5 454 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 SMC4Q9NTJ3 1288 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 CIZ1Q9ULV3 898 aaPredicted RBP11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 PRUNE2Q8WUY3 3088 aa11.45□□□□□ -0.58
NIF3L1-203ENST00000409129 LAMA2P24043 3122 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 SPDYE5A6NIY4 337 aa11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 ARHGEF6Q15052 776 aa11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 ERO1BQ86YB8 467 aa11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 TRMT2AQ8IZ69 625 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 ZKSCAN4Q969J2 545 aaPredicted RBP11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 WRNIP1Q96S55 665 aa11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 SNCAIPQ9Y6H5 919 aa11.44□□□□□ -0.58
NIF3L1-203ENST00000409129 CIAO1O76071 339 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 UBTFL1P0CB47 393 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 CETPP11597 493 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 DCAF15Q66K64 600 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 SIL1Q9H173 461 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 CEP126Q9P2H0 1117 aa11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-203ENST00000409129 A0A1W2PPC1 479 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 IRF6O14896 467 aa11.42□□□□□ -0.58
NIF3L1-203ENST00000409129 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 276.7 ms