RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
SNX13-201ENST00000409076 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 LINC00301Q8NCQ3 95 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 CAGE1Q8TC20 777 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 UBAC1Q9BSL1 405 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 SUGCTQ9HAC7 445 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 VAT1LQ9HCJ6 419 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 TBX22Q9Y458 520 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 VWA3AA6NCI4 1184 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 CTAGE5O15320 804 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
SNX13-201ENST00000409076 ARHGEF25Q86VW2 580 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 DIS3L2Q8IYB7 885 aaKnown RBP9.56□□□□□ -0.88
SNX13-201ENST00000409076 NUP88Q99567 741 aaPredicted RBP9.56□□□□□ -0.88
SNX13-201ENST00000409076 SLC4A4Q9Y6R1 1079 aa9.56□□□□□ -0.88
SNX13-201ENST00000409076 SOWAHDA6NJG2 315 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 ENC1O14682 589 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 TOGARAM2Q6ZUX3 1019 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 TBC1D10CQ8IV04 446 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 VPS18Q9P253 973 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 KCNH3Q9ULD8 1083 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 IL15P40933 162 aaPredicted RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 PDE4BQ07343 736 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 ILDR1Q86SU0 546 aaPredicted RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 TMOD3Q9NYL9 352 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 GUCA1BQ9UMX6 200 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.55□□□□□ -0.882e-8■■■■■ 31.6
SNX13-201ENST00000409076 WTIPA6NIX2 430 aaPredicted RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 HMGB1P09429 215 aaKnown RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 RNASE9P60153 205 aaKnown RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 TRMT1LQ7Z2T5 733 aaKnown RBP9.55□□□□□ -0.88
SNX13-201ENST00000409076 TRIM22Q8IYM9 498 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 WDR24Q96S15 920 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.55□□□□□ -0.883e-7■□□□□ 8.9
SNX13-201ENST00000409076 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 NEO1Q92859 1461 aa9.55□□□□□ -0.88
SNX13-201ENST00000409076 ARHGAP31Q2M1Z3 1444 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 NUTM2BA6NNL0 878 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 NUTM2EB1AL46 878 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 OAS2P29728 719 aaKnown RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 ST5P78524 1137 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 HLFQ16534 295 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 TTC19Q6DKK2 380 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 KRBA2Q6ZNG9 492 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 NUTM2AQ8IVF1 878 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 ERO1AQ96HE7 468 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 BAG1Q99933 345 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 SEC31BQ9NQW1 1179 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 USP32Q8NFA0 1604 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 MCM7P33993 719 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 MYL5Q02045 173 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 FBXO18Q8NFZ0 1043 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 RASGRP4Q8TDF6 673 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 TAB2Q9NYJ8 693 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 ARAP3Q8WWN8 1544 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 ADAMTS2O95450 1211 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 GSDMDP57764 484 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 FAM47AQ5JRC9 791 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 ACRBPQ8NEB7 543 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 CDC5LQ99459 802 aaKnown RBP9.54□□□□□ -0.88
SNX13-201ENST00000409076 CENPHQ9H3R5 247 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
SNX13-201ENST00000409076 TEX33O43247 280 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 BCAMP50895 628 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 NLRP12P59046 1061 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 PPP2R3AQ06190 1150 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 ADALQ6DHV7 355 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 FMR1NBQ8N0W7 255 aaPredicted RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 JMYQ8N9B5 988 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 GTPBP4Q9BZE4 634 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 PIH1D3Q9NQM4 214 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 CTNND2Q9UQB3 1225 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 PCDHB6Q9Y5E3 794 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 ELP1O95163 1332 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 EPB41L2O43491 1005 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 KIF23Q02241 960 aaPredicted RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 NOM1Q5C9Z4 860 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 MFSD6Q6ZSS7 791 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 ATG9AQ7Z3C6 839 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 GSPT2Q8IYD1 628 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 PLBD2Q8NHP8 589 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
SNX13-201ENST00000409076 N4BP3O15049 544 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
SNX13-201ENST00000409076 MCAMP43121 646 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 ATP2B2Q01814 1243 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
SNX13-201ENST00000409076 NBPF11Q86T75 865 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms