RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 USP2O75604 605 aaPredicted RBP11.95□□□□□ -0.5
NIF3L1-202ENST00000409020 ARMC9Q7Z3E5 817 aa11.95□□□□□ -0.5
NIF3L1-202ENST00000409020 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
NIF3L1-202ENST00000409020 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
NIF3L1-202ENST00000409020 A0A1B0GUL7 405 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 GJA5P36382 358 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 MAP3K11Q16584 847 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 CCDC102BQ68D86 513 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 ABHD8Q96I13 439 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 ZDHHC15Q96MV8 337 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 R3HDMLQ9H3Y0 253 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 SAGE1Q9NXZ1 904 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 TBC1D8O95759 1140 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 RASGRF1Q13972 1273 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 SPRYD7Q5W111 196 aa11.94□□□□□ -0.5
NIF3L1-202ENST00000409020 OTOFQ9HC10 1997 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 MYH13Q9UKX3 1938 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 HDLBPQ00341 1268 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 NFIAQ12857 509 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 SUPT20HL1Q3ZLR7 823 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 FTSJ3Q8IY81 847 aaKnown RBP11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 WDR66Q8TBY9 1149 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 XAGE2Q96GT9 111 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 MCOLN1Q9GZU1 580 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 HDAC5Q9UQL6 1122 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 DAGLAQ9Y4D2 1042 aa11.93□□□□□ -0.5
NIF3L1-202ENST00000409020 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 TM4SF4P48230 202 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 TNFAIP1Q13829 316 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 HHIPL2Q6UWX4 724 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 DHX37Q8IY37 1157 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 SLC10A4Q96EP9 437 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 WNK4Q96J92 1243 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 ELP3Q9H9T3 547 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 SUGT1Q9Y2Z0 365 aa11.92□□□□□ -0.5
NIF3L1-202ENST00000409020 ZBTB7BO15156 539 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 ZNF384Q8TF68 577 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 NEUROD6Q96NK8 337 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 AKAP11Q9UKA4 1901 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 LDHBP07195 334 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 DGKZQ13574 1117 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 VGLL4Q14135 290 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 ZFPM1Q8IX07 1006 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 MRIQ9BWK5 157 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 GNL3LQ9NVN8 582 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
NIF3L1-202ENST00000409020 MAST3O60307 1309 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 SALL1Q9NSC2 1324 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 SLURP2P0DP57 97 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 TCP10Q12799 353 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 ANKRD13AQ8IZ07 590 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 SSH3Q8TE77 659 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 HMG20BQ9P0W2 317 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 ABCF2Q9UG63 623 aa11.9□□□□□ -0.5
NIF3L1-202ENST00000409020 SEMA3EO15041 775 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 TNNI2P48788 182 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 ATP8B2P98198 1209 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 G3BP1Q13283 466 aaKnown RBP eCLIP11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 MIGA2Q7L4E1 593 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 ZNF296Q8WUU4 475 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 OPTNQ96CV9 577 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 PTPN18Q99952 460 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 AKAP2Q9Y2D5 859 aa11.89□□□□□ -0.51
NIF3L1-202ENST00000409020 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 MCAMP43121 646 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 SREBF2Q12772 1141 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 NBR1Q14596 966 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 CEP85Q6P2H3 762 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 FAM83AQ86UY5 434 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 IFNL1Q8IU54 200 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 USP40Q9NVE5 1235 aa11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 TLR7Q9NYK1 1049 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-202ENST00000409020 SURF6O75683 361 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 MECOMQ03112 1051 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 FKBP1CQ5VVH2 108 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 WRNIP1Q96S55 665 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 DBNDD2Q9BQY9 259 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 TMOD2Q9NZR1 351 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 SNCAIPQ9Y6H5 919 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 GAKO14976 1311 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 RFX7Q2KHR2 1363 aa11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 MANSC4A6NHS7 340 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-202ENST00000409020 GPR25O00155 361 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms