RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 CTGFP29279 349 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 FKBP1AP62942 108 aaKnown RBP11.95□□□□□ -0.5
NUP43-204ENST00000403890 SNAPC2Q13487 334 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.95□□□□□ -0.5
NUP43-204ENST00000403890 TEPSINQ96N21 525 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 GDF15Q99988 308 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
NUP43-204ENST00000403890 ZNF70Q9UC06 446 aaPredicted RBP11.95□□□□□ -0.5
NUP43-204ENST00000403890 CPA4Q9UI42 421 aa11.95□□□□□ -0.5
NUP43-204ENST00000403890 MYPNQ86TC9 1320 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 TFRCP02786 760 aaKnown RBP11.94□□□□□ -0.5
NUP43-204ENST00000403890 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 LRIT3Q3SXY7 679 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 ERO1BQ86YB8 467 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 MPHOSPH8Q99549 860 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 UNC93B1Q9H1C4 597 aa11.94□□□□□ -0.5
NUP43-204ENST00000403890 ZSWIM8A7E2V4 1837 aa11.93□□□□□ -0.5
NUP43-204ENST00000403890 IRF6O14896 467 aa11.93□□□□□ -0.5
NUP43-204ENST00000403890 DDX58O95786 925 aaKnown RBP11.93□□□□□ -0.5
NUP43-204ENST00000403890 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
NUP43-204ENST00000403890 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
NUP43-204ENST00000403890 IL1R1P14778 569 aa11.93□□□□□ -0.5
NUP43-204ENST00000403890 C15orf52Q6ZUT6 534 aaKnown RBP11.93□□□□□ -0.5
NUP43-204ENST00000403890 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
NUP43-204ENST00000403890 TDRD3Q9H7E2 651 aaKnown RBP11.93□□□□□ -0.5
NUP43-204ENST00000403890 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 ITGA6P23229 1130 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 TNNI2P48788 182 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 PRKCZQ05513 592 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 CHRNDQ07001 517 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 ZNF804AQ7Z570 1209 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 SNCAIPQ9Y6H5 919 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 OTOFQ9HC10 1997 aa11.92□□□□□ -0.5
NUP43-204ENST00000403890 SNAP23O00161 211 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 BCAMP50895 628 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 PPIL2Q13356 520 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
NUP43-204ENST00000403890 KRTAP3-3Q9BYR6 98 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 KRTAP3-2Q9BYR7 98 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 PRDM6Q9NQX0 595 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 SERPINA10Q9UK55 444 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 JAG2Q9Y219 1238 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
NUP43-204ENST00000403890 IRS2Q9Y4H2 1338 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 PDHXO00330 501 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 ADCY3O60266 1144 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 IGKV5-2P06315 115 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 FCGRTP55899 365 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 TDHQ8IZJ6 230 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
NUP43-204ENST00000403890 ZKSCAN4Q969J2 545 aaPredicted RBP11.9□□□□□ -0.5
NUP43-204ENST00000403890 PAWRQ96IZ0 340 aaKnown RBP11.9□□□□□ -0.5
NUP43-204ENST00000403890 DEFB118Q96PH6 123 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 WRNIP1Q96S55 665 aa11.9□□□□□ -0.5
NUP43-204ENST00000403890 TTF2Q9UNY4 1162 aaKnown RBP11.9□□□□□ -0.5
NUP43-204ENST00000403890 TAF5LO75529 589 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 PPATQ06203 517 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 NEXNQ0ZGT2 675 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 C7orf61Q8IZ16 206 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.89□□□□□ -0.51
NUP43-204ENST00000403890 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 ZMYND8Q9ULU4 1186 aaPredicted RBP11.89□□□□□ -0.51
NUP43-204ENST00000403890 GABRQQ9UN88 632 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 TTC28Q96AY4 2481 aa11.89□□□□□ -0.51
NUP43-204ENST00000403890 ADGRA2Q96PE1 1338 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 SPEF2Q9C093 1822 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 POTEB3A0JP26 581 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 H7C1W4 665 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
NUP43-204ENST00000403890 RIOK3O14730 519 aaKnown RBP11.88□□□□□ -0.51
NUP43-204ENST00000403890 INHAP05111 366 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 CSF1RP07333 972 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 MFSD14BQ5SR56 506 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 POTEBQ6S5H4 581 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 KSR2Q6VAB6 950 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 UBE3BQ7Z3V4 1068 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 PXYLP1Q8TE99 480 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 HOOK2Q96ED9 719 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 CRISPLD2Q9H0B8 497 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
NUP43-204ENST00000403890 VCANP13611 3396 aa11.88□□□□□ -0.51
NUP43-204ENST00000403890 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 RPTORQ8N122 1335 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 BCRP11274 1271 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 ELNP15502 786 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 MAGEA10P43363 369 aaPredicted RBP11.87□□□□□ -0.51
NUP43-204ENST00000403890 CRKP46108 304 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 FLT3LGP49771 235 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 PLA2G12BQ9BX93 195 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 CHMP4AQ9BY43 222 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 UBE2OQ9C0C9 1292 aaKnown RBP11.87□□□□□ -0.51
NUP43-204ENST00000403890 TAOK2Q9UL54 1235 aa11.87□□□□□ -0.51
NUP43-204ENST00000403890 ANKRD18BA2A2Z9 1011 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms