RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NDUFA8P51970 172 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 AMIGO3Q86WK7 504 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 A0A1B0GVL5 298 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 GPTP24298 496 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 CCDC191Q8NCU4 936 aa23.01■■□□□ 1.27
CCDC47-202ENST00000403162 HMGB2P26583 209 aaKnown RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 STK38Q15208 465 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 TTLL5Q6EMB2 1281 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 BRAPQ7Z569 592 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 KIF18AQ8NI77 898 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 A0A1B0GUL7 405 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 DHX16O60231 1041 aaKnown RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 PPFIA3O75145 1194 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 SF3B2Q13435 895 aaKnown RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 LRRFIP1Q32MZ4 808 aaKnown RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 ERCC4Q92889 916 aaPredicted RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 OSBP2Q969R2 916 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 ERO1AQ96HE7 468 aa23■■□□□ 1.27
CCDC47-202ENST00000403162 ZNF215Q9UL58 517 aaPredicted RBP23■■□□□ 1.27
CCDC47-202ENST00000403162 LRRC24Q50LG9 513 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 CCDC150Q8NCX0 1101 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 ZNF397Q8NF99 534 aaPredicted RBP22.99■■□□□ 1.27
CCDC47-202ENST00000403162 FBXO18Q8NFZ0 1043 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 C8orf76Q96K31 380 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 CLIC4Q9Y696 253 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 MORC2Q9Y6X9 1032 aaPredicted RBP22.99■■□□□ 1.27
CCDC47-202ENST00000403162 KCNJ6P48051 423 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 SF3A1Q15459 793 aaKnown RBP22.99■■□□□ 1.27
CCDC47-202ENST00000403162 ZRSR1Q15695 479 aaKnown RBP22.99■■□□□ 1.27
CCDC47-202ENST00000403162 DPCR1Q3MIW9 517 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 RGS22Q8NE09 1264 aa22.99■■□□□ 1.27
CCDC47-202ENST00000403162 ARHGEF1Q92888 912 aaKnown RBP22.99■■□□□ 1.27
CCDC47-202ENST00000403162 NUP98P52948 1817 aa22.98■■□□□ 1.27
CCDC47-202ENST00000403162 SPTLC2O15270 562 aa22.98■■□□□ 1.27
CCDC47-202ENST00000403162 EN1Q05925 392 aaPredicted RBP22.98■■□□□ 1.27
CCDC47-202ENST00000403162 TRIM28Q13263 835 aaKnown RBP22.98■■□□□ 1.27
CCDC47-202ENST00000403162 TRAPPC3LQ5T215 181 aa22.98■■□□□ 1.27
CCDC47-202ENST00000403162 TRMT1Q9NXH9 659 aaKnown RBP22.98■■□□□ 1.27
CCDC47-202ENST00000403162 IMMTQ16891 758 aaKnown RBP22.97■■□□□ 1.27
CCDC47-202ENST00000403162 MYSM1Q5VVJ2 828 aa22.97■■□□□ 1.27
CCDC47-202ENST00000403162 ZNF652Q9Y2D9 606 aa22.97■■□□□ 1.27
CCDC47-202ENST00000403162 FOXP2O15409 715 aa22.97■■□□□ 1.27
CCDC47-202ENST00000403162 ZPR1O75312 459 aa22.97■■□□□ 1.27
CCDC47-202ENST00000403162 ZFYP08048 801 aaPredicted RBP22.97■■□□□ 1.27
CCDC47-202ENST00000403162 GPHNQ9NQX3 736 aaPredicted RBP22.97■■□□□ 1.27
CCDC47-202ENST00000403162 SRP68Q9UHB9 627 aaKnown RBP22.97■■□□□ 1.27
CCDC47-202ENST00000403162 NARFQ9UHQ1 456 aa22.97■■□□□ 1.27
CCDC47-202ENST00000403162 RFC4P35249 363 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 NLRP12P59046 1061 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 GABPB1Q06547 395 aaPredicted RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 NLRP10Q86W26 655 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 MB21D2Q8IYB1 491 aaPredicted RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 HPS5Q9UPZ3 1129 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 SLC3A2P08195 630 aaKnown RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 EZH2Q15910 746 aaKnown RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 OTUD7BQ6GQQ9 843 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 ZNF34Q8IZ26 560 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 FBXW7Q969H0 707 aa22.96■■□□□ 1.27
CCDC47-202ENST00000403162 XPO4Q9C0E2 1151 aaKnown RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 ORC3Q9UBD5 711 aaPredicted RBP22.96■■□□□ 1.27
CCDC47-202ENST00000403162 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-202ENST00000403162 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 WDR19Q8NEZ3 1342 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 C4AP0C0L4 1744 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 PSDA5PKW4 1024 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-202ENST00000403162 PRC1O43663 620 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 SLU7O95391 586 aaKnown RBP22.95■■□□□ 1.26
CCDC47-202ENST00000403162 TPM4P67936 248 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 E4F1Q66K89 784 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-202ENST00000403162 ZNF594Q96JF6 807 aaPredicted RBP22.95■■□□□ 1.26
CCDC47-202ENST00000403162 CAMKK2Q96RR4 588 aa22.95■■□□□ 1.26
CCDC47-202ENST00000403162 ANKRD36CQ5JPF3 1778 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 KLF18A0A0U1RQI7 1052 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 GOLGA8BA8MQT2 603 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 ZNF202O95125 648 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 POLR3DP05423 398 aaPredicted RBP22.94■■□□□ 1.26
CCDC47-202ENST00000403162 ADRA2BP18089 450 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 CLEC4GQ6UXB4 293 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 IFNKQ9P0W0 207 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 BCORQ6W2J9 1755 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 BAG6P46379 1132 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 KMT5BQ4FZB7 885 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 ARMCX5Q6P1M9 558 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 CEP126Q9P2H0 1117 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 UBN2Q6ZU65 1347 aa22.94■■□□□ 1.26
CCDC47-202ENST00000403162 SMC2O95347 1197 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 TUBB4AP04350 444 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 CMA1P23946 247 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 NCAPHQ15003 741 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 ZNF827Q17R98 1081 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 AXDND1Q5T1B0 1012 aaPredicted RBP22.93■■□□□ 1.26
CCDC47-202ENST00000403162 SYNE3Q6ZMZ3 975 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 L2HGDHQ9H9P8 463 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 NIP7Q9Y221 180 aaKnown RBP eCLIP22.93■■□□□ 1.26
CCDC47-202ENST00000403162 UBR3Q6ZT12 1888 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 ABCC12Q96J65 1359 aa22.93■■□□□ 1.26
CCDC47-202ENST00000403162 FGAP02671 866 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms