RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 GPR75-ASB3A0A0A6YYF3 556 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 LDHCP07864 332 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 NBPF12Q5TAG4 269 aaPredicted RBP23.44■■□□□ 1.34
RTN4-207ENST00000402434 CYP4F22Q6NT55 531 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 TMEM39BQ9GZU3 492 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 PIH1D3Q9NQM4 214 aaKnown RBP23.44■■□□□ 1.34
RTN4-207ENST00000402434 USP40Q9NVE5 1235 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 PCNTO95613 3336 aa23.44■■□□□ 1.34
RTN4-207ENST00000402434 SSC5DA1L4H1 1573 aa23.43■■□□□ 1.34
RTN4-207ENST00000402434 RGMBQ6NW40 437 aa23.43■■□□□ 1.34
RTN4-207ENST00000402434 MOB2Q70IA6 237 aa23.43■■□□□ 1.34
RTN4-207ENST00000402434 BCL11AQ9H165 835 aa23.43■■□□□ 1.34
RTN4-207ENST00000402434 NDUFB9Q9Y6M9 179 aa23.43■■□□□ 1.34
RTN4-207ENST00000402434 ATP5JP18859 108 aa23.42■■□□□ 1.34
RTN4-207ENST00000402434 BTDP43251 543 aa23.42■■□□□ 1.34
RTN4-207ENST00000402434 MAP3K11Q16584 847 aa23.42■■□□□ 1.34
RTN4-207ENST00000402434 ANTXR1Q9H6X2 564 aa23.42■■□□□ 1.34
RTN4-207ENST00000402434 UBE2Q2LH0YL09 131 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 NFIAQ12857 509 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 NAA16Q6N069 864 aaPredicted RBP23.41■■□□□ 1.34
RTN4-207ENST00000402434 PAXIP1Q6ZW49 1069 aaPredicted RBP23.41■■□□□ 1.34
RTN4-207ENST00000402434 ARMC9Q7Z3E5 817 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 CDAN1Q8IWY9 1227 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 FAM151AQ8WW52 585 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 IDI2Q9BXS1 227 aa23.41■■□□□ 1.34
RTN4-207ENST00000402434 MYO5AQ9Y4I1 1855 aaKnown RBP23.4■■□□□ 1.34
RTN4-207ENST00000402434 PPP1R12BO60237 982 aaPredicted RBP23.4■■□□□ 1.34
RTN4-207ENST00000402434 MAP4K4O95819 1239 aaPredicted RBP23.4■■□□□ 1.34
RTN4-207ENST00000402434 RHBDL3P58872 404 aa23.4■■□□□ 1.34
RTN4-207ENST00000402434 TTLL12Q14166 644 aaPredicted RBP23.4■■□□□ 1.34
RTN4-207ENST00000402434 LDLRAD1Q5T700 205 aa23.4■■□□□ 1.34
RTN4-207ENST00000402434 TMED8Q6PL24 325 aaPredicted RBP23.4■■□□□ 1.34
RTN4-207ENST00000402434 CCDC102AQ96A19 550 aa23.4■■□□□ 1.34
RTN4-207ENST00000402434 FAM198AQ9UFP1 575 aa23.4■■□□□ 1.34
RTN4-207ENST00000402434 FAM155AB1AL88 458 aaPredicted RBP23.39■■□□□ 1.34
RTN4-207ENST00000402434 MAP2K2P36507 400 aa23.39■■□□□ 1.34
RTN4-207ENST00000402434 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.34
RTN4-207ENST00000402434 GCC1Q96CN9 775 aa23.39■■□□□ 1.34
RTN4-207ENST00000402434 RFX7Q2KHR2 1363 aa23.39■■□□□ 1.33
RTN4-207ENST00000402434 RPAP1Q9BWH6 1393 aaPredicted RBP23.39■■□□□ 1.33
RTN4-207ENST00000402434 WDHD1O75717 1129 aaPredicted RBP23.38■■□□□ 1.33
RTN4-207ENST00000402434 ZNF157P51786 506 aaPredicted RBP23.38■■□□□ 1.33
RTN4-207ENST00000402434 PRKG1Q13976 671 aa23.38■■□□□ 1.33
RTN4-207ENST00000402434 ANGEL1Q9UNK9 670 aaKnown RBP23.38■■□□□ 1.33
RTN4-207ENST00000402434 UNCXA6NJT0 531 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 ENTPD3O75355 529 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 USP2O75604 605 aaPredicted RBP23.37■■□□□ 1.33
RTN4-207ENST00000402434 IDH1O75874 414 aaKnown RBP23.37■■□□□ 1.33
RTN4-207ENST00000402434 PPP4CP60510 307 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 MAP3K12Q12852 859 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 NOGQ13253 232 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 GRM1Q13255 1194 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 ADGRA1Q86SQ6 560 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 HAUS7Q99871 368 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 BOLA2Q9H3K6 86 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 RWDD1Q9H446 243 aaPredicted RBP23.37■■□□□ 1.33
RTN4-207ENST00000402434 ECHDC1Q9NTX5 307 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 FZD1Q9UP38 647 aa23.37■■□□□ 1.33
RTN4-207ENST00000402434 NPM3O75607 178 aaKnown RBP23.36■■□□□ 1.33
RTN4-207ENST00000402434 TCP10Q12799 353 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 MAST2Q6P0Q8 1798 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 THSD7BQ9C0I4 1608 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 GOLIM4O00461 696 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 AOC2O75106 756 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 BAG3O95817 575 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 SLC10A3P09131 477 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 RGS3P49796 1198 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 HOOK2Q96ED9 719 aa23.36■■□□□ 1.33
RTN4-207ENST00000402434 DNAJC2Q99543 621 aaKnown RBP23.36■■□□□ 1.33
RTN4-207ENST00000402434 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
RTN4-207ENST00000402434 ZFPM1Q8IX07 1006 aa23.35■■□□□ 1.33
RTN4-207ENST00000402434 SMC5Q8IY18 1101 aa23.35■■□□□ 1.33
RTN4-207ENST00000402434 PAG1Q9NWQ8 432 aa23.35■■□□□ 1.33
RTN4-207ENST00000402434 IGHDP01880 384 aa23.34■■□□□ 1.33
RTN4-207ENST00000402434 CYP7A1P22680 504 aa23.34■■□□□ 1.33
RTN4-207ENST00000402434 IREB2P48200 963 aaKnown RBP23.34■■□□□ 1.33
RTN4-207ENST00000402434 RASAL3Q86YV0 1011 aa23.34■■□□□ 1.33
RTN4-207ENST00000402434 MAGEB6Q8N7X4 407 aa23.34■■□□□ 1.33
RTN4-207ENST00000402434 EDC3Q96F86 508 aaKnown RBP23.34■■□□□ 1.33
RTN4-207ENST00000402434 GPATCH3Q96I76 525 aa23.34■■□□□ 1.33
RTN4-207ENST00000402434 NOL10Q9BSC4 688 aaKnown RBP23.34■■□□□ 1.33
RTN4-207ENST00000402434 DDX4Q9NQI0 724 aaKnown RBP23.34■■□□□ 1.33
RTN4-207ENST00000402434 PLCG2P16885 1265 aa23.33■■□□□ 1.33
RTN4-207ENST00000402434 IRX6P78412 446 aaPredicted RBP23.33■■□□□ 1.33
RTN4-207ENST00000402434 MAP2K1Q02750 393 aaPredicted RBP23.33■■□□□ 1.33
RTN4-207ENST00000402434 ANKRD45Q5TZF3 282 aa23.33■■□□□ 1.33
RTN4-207ENST00000402434 WBP1LQ9NX94 342 aa23.33■■□□□ 1.33
RTN4-207ENST00000402434 AATFQ9NY61 560 aaKnown RBP eCLIP23.33■■□□□ 1.33
RTN4-207ENST00000402434 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
RTN4-207ENST00000402434 SH3RF3Q8TEJ3 882 aaPredicted RBP23.32■■□□□ 1.32
RTN4-207ENST00000402434 ZIC5Q96T25 663 aa23.32■■□□□ 1.32
RTN4-207ENST00000402434 TTC41PQ6P2S7 1318 aa23.32■■□□□ 1.32
RTN4-207ENST00000402434 SLC9C2Q5TAH2 1124 aa23.31■■□□□ 1.32
RTN4-207ENST00000402434 SH3BP5LQ7L8J4 393 aa23.31■■□□□ 1.32
RTN4-207ENST00000402434 CERS3Q8IU89 383 aa23.31■■□□□ 1.32
RTN4-207ENST00000402434 OTUD7AQ8TE49 926 aaPredicted RBP23.31■■□□□ 1.32
RTN4-207ENST00000402434 SALL3Q9BXA9 1300 aa23.31■■□□□ 1.32
RTN4-207ENST00000402434 PDE6AP16499 860 aa23.3■■□□□ 1.32
RTN4-207ENST00000402434 DCAF15Q66K64 600 aa23.3■■□□□ 1.32
RTN4-207ENST00000402434 TEX11Q8IYF3 940 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms