RNA–Protein interactions for RNA: ENST00000401533.6

GAREM2-201, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAREM2, Length 4,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-201ENST00000401533 PCCAP05165 728 aaPredicted RBP21.26■□□□□ 0.99
GAREM2-201ENST00000401533 PCDHA7Q9UN72 937 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 WDR17Q8IZU2 1322 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 IDEP14735 1019 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 GPS2Q13227 327 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 RIOK3O14730 519 aaKnown RBP21.26■□□□□ 0.99
GAREM2-201ENST00000401533 CLIC6Q96NY7 704 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 MAPK8IP1Q9UQF2 711 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 ERICH4A6NGS2 130 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 GNPATO15228 680 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 NEMFO60524 1076 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 MCM7P33993 719 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 GIGYF2Q6Y7W6 1299 aaKnown RBP21.26■□□□□ 0.99
GAREM2-201ENST00000401533 NUP88Q99567 741 aaPredicted RBP21.26■□□□□ 0.99
GAREM2-201ENST00000401533 ZNHIT6Q9NWK9 470 aaKnown RBP21.26■□□□□ 0.99
GAREM2-201ENST00000401533 WWC3Q9ULE0 1092 aa21.26■□□□□ 0.99
GAREM2-201ENST00000401533 POLR2DO15514 142 aaKnown RBP21.25■□□□□ 0.99
GAREM2-201ENST00000401533 KIF4BQ2VIQ3 1234 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 HEATR3Q7Z4Q2 680 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 AATFQ9NY61 560 aaKnown RBP eCLIP21.25■□□□□ 0.99
GAREM2-201ENST00000401533 MRVI1Q9Y6F6 885 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 HEG1Q9ULI3 1381 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 TMTC2Q8N394 836 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 AK7Q96M32 723 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 DEF6Q9H4E7 631 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 CCDC87Q9NVE4 849 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 H7C1W4 665 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 BRINP3Q76B58 766 aa21.25■□□□□ 0.99
GAREM2-201ENST00000401533 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
GAREM2-201ENST00000401533 VWA3AA6NCI4 1184 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 N4BP3O15049 544 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 DDIT3P35638 169 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 ADGRL3Q9HAR2 1447 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 VIRMAQ69YN4 1812 aaKnown RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 ZNF335Q9H4Z2 1342 aaPredicted RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 PRKAB2O43741 272 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 PDE8BO95263 885 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 PRKCSHP14314 528 aaPredicted RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 DNA2P51530 1060 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 NDUFA8P51970 172 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 SYT10Q6XYQ8 523 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 KCNH3Q9ULD8 1083 aa21.24■□□□□ 0.99
GAREM2-201ENST00000401533 RGPD8O14715 1765 aaPredicted RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 TRMT1LQ7Z2T5 733 aaKnown RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 KRI1Q8N9T8 703 aaKnown RBP21.24■□□□□ 0.99
GAREM2-201ENST00000401533 PICALMQ13492 652 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 CCDC96Q2M329 555 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 RRAGBQ5VZM2 374 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 ZNF274Q96GC6 653 aaPredicted RBP21.23■□□□□ 0.99
GAREM2-201ENST00000401533 RNF216Q9NWF9 866 aaPredicted RBP21.23■□□□□ 0.99
GAREM2-201ENST00000401533 BTBD18B2RXH4 712 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 TSPY3P0CV98 308 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 TSPY8P0CW00 308 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 TRMT44Q8IYL2 757 aaKnown RBP21.23■□□□□ 0.99
GAREM2-201ENST00000401533 CARD10Q9BWT7 1032 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 VPS54Q9P1Q0 977 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 MAP3K15Q6ZN16 1313 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 RIMS1Q86UR5 1692 aaKnown RBP21.23■□□□□ 0.99
GAREM2-201ENST00000401533 ZSCAN12O43309 604 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 ZNF827Q17R98 1081 aa21.23■□□□□ 0.99
GAREM2-201ENST00000401533 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.23■□□□□ 0.99
GAREM2-201ENST00000401533 FAM47AQ5JRC9 791 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 CCDC70Q6NSX1 233 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 PPP1R1BQ9UD71 204 aaPredicted RBP21.22■□□□□ 0.99
GAREM2-201ENST00000401533 TCEAL9Q9UHQ7 104 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 ZHX1Q9UKY1 873 aaPredicted RBP21.22■□□□□ 0.99
GAREM2-201ENST00000401533 SCARF1Q14162 830 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 NOM1Q5C9Z4 860 aaKnown RBP21.22■□□□□ 0.99
GAREM2-201ENST00000401533 IFNL3Q8IZI9 196 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 KAZALD1Q96I82 304 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 SAP30BPQ9UHR5 308 aaKnown RBP21.22■□□□□ 0.99
GAREM2-201ENST00000401533 PNOCQ13519 176 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 HSP90B2PQ58FF3 399 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 TMEM87BQ96K49 555 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
GAREM2-201ENST00000401533 KARSQ15046 597 aaKnown RBP21.22■□□□□ 0.99
GAREM2-201ENST00000401533 KIF5BP33176 963 aa21.21■□□□□ 0.99
GAREM2-201ENST00000401533 NLRP10Q86W26 655 aa21.21■□□□□ 0.99
GAREM2-201ENST00000401533 FBXO18Q8NFZ0 1043 aa21.21■□□□□ 0.99
GAREM2-201ENST00000401533 PIK3C2AO00443 1686 aa21.21■□□□□ 0.99
GAREM2-201ENST00000401533 POLR3GO15318 223 aaPredicted RBP21.21■□□□□ 0.99
GAREM2-201ENST00000401533 TPTE2Q6XPS3 522 aa21.21■□□□□ 0.99
GAREM2-201ENST00000401533 C11orf57Q6ZUT1 292 aaPredicted RBP21.21■□□□□ 0.99
GAREM2-201ENST00000401533 PFKFB1P16118 471 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 TNNT3P45378 269 aaPredicted RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 AKNAD1Q5T1N1 836 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 CRACR2BQ8N4Y2 399 aaPredicted RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 UBAP1LF5GYI3 381 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 BAG3O95817 575 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 PDIA6Q15084 440 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 UIMC1Q96RL1 719 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 CTDP1Q9Y5B0 961 aaPredicted RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 ZNF500O60304 480 aaPredicted RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 CASQ1P31415 396 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 KIAA1328Q86T90 577 aa21.2■□□□□ 0.98
GAREM2-201ENST00000401533 CCDC43Q96MW1 224 aaKnown RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 XPO4Q9C0E2 1151 aaKnown RBP21.2■□□□□ 0.98
GAREM2-201ENST00000401533 GNAT2P19087 354 aa21.19■□□□□ 0.98
GAREM2-201ENST00000401533 CLEC17AQ6ZS10 378 aa21.19■□□□□ 0.98
GAREM2-201ENST00000401533 CCDC150Q8NCX0 1101 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms