RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
COL18A1-204ENST00000400337 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
COL18A1-204ENST00000400337 SLU7O95391 586 aaKnown RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 FAM98CQ17RN3 349 aaKnown RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 DIS3L2Q8IYB7 885 aaKnown RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 SELENOOQ9BVL4 669 aa20.54■□□□□ 0.88
COL18A1-204ENST00000400337 SPATA5Q8NB90 893 aa20.54■□□□□ 0.88
COL18A1-204ENST00000400337 EDC3Q96F86 508 aaKnown RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 GTPBP4Q9BZE4 634 aaKnown RBP20.54■□□□□ 0.88
COL18A1-204ENST00000400337 HSF2BPO75031 334 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 RBSNQ9H1K0 784 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 LUC7L2Q9Y383 392 aaKnown RBP20.53■□□□□ 0.88
COL18A1-204ENST00000400337 MAGI3Q5TCQ9 1506 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 SAMD9Q5K651 1589 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 HSPA4P34932 840 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 KCNH3Q9ULD8 1083 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 ZNF532Q9HCE3 1301 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 MRPL12P52815 198 aaKnown RBP20.53■□□□□ 0.88
COL18A1-204ENST00000400337 HS1BP3Q53T59 392 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 MCM6Q14566 821 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 SLAIN2Q9P270 581 aa20.53■□□□□ 0.88
COL18A1-204ENST00000400337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL18A1-204ENST00000400337 SV2BQ7L1I2 683 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 CALCOCO1Q9P1Z2 691 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 PLXNC1O60486 1568 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 TUBB4AP04350 444 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 MICALCLQ6ZW33 695 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 IMPG2Q9BZV3 1241 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 CEP112Q8N8E3 955 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 PHKBQ93100 1093 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 FAM107BQ9H098 131 aa20.52■□□□□ 0.88
COL18A1-204ENST00000400337 CFAP65Q6ZU64 1925 aaKnown RBP20.52■□□□□ 0.87
COL18A1-204ENST00000400337 SP4Q02446 784 aa20.52■□□□□ 0.87
COL18A1-204ENST00000400337 ATP5JP18859 108 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 CCT6AP40227 531 aaKnown RBP20.51■□□□□ 0.87
COL18A1-204ENST00000400337 WDR66Q8TBY9 1149 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 SRRTQ9BXP5 876 aaKnown RBP20.51■□□□□ 0.87
COL18A1-204ENST00000400337 POLD1P28340 1107 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 TRERF1Q96PN7 1200 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 PLCD1P51178 756 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 SYT10Q6XYQ8 523 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 CLEC11AQ9Y240 323 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 TCIRG1Q13488 830 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 ZNF569Q5MCW4 686 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 CAPZA3Q96KX2 299 aa20.51■□□□□ 0.87
COL18A1-204ENST00000400337 AKNAD1Q5T1N1 836 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 INCENPQ9NQS7 918 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 JAK2O60674 1132 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 SSH3Q8TE77 659 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
COL18A1-204ENST00000400337 PKD2L1Q9P0L9 805 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 CTNND2Q9UQB3 1225 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 GSPT1P15170 499 aaKnown RBP20.5■□□□□ 0.87
COL18A1-204ENST00000400337 CDC37L1Q7L3B6 337 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 KRT222Q8N1A0 295 aa20.5■□□□□ 0.87
COL18A1-204ENST00000400337 PHKG2P15735 406 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 CLSTN2Q9H4D0 955 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 POLR2DO15514 142 aaKnown RBP20.49■□□□□ 0.87
COL18A1-204ENST00000400337 PRPHP41219 470 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 FCHSD1Q86WN1 690 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 CCDC65Q8IXS2 484 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 BBXQ8WY36 941 aaPredicted RBP20.49■□□□□ 0.87
COL18A1-204ENST00000400337 FAM212AQ96EL1 285 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 GJC1P36383 396 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 CNGA4Q8IV77 575 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 NAP1L4Q99733 375 aaKnown RBP20.49■□□□□ 0.87
COL18A1-204ENST00000400337 TMEM110-MUSTN1A8MSY1 372 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 MAPK8IP2Q13387 824 aaPredicted RBP20.49■□□□□ 0.87
COL18A1-204ENST00000400337 GOLGA1Q92805 767 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 FERMT1Q9BQL6 677 aa20.49■□□□□ 0.87
COL18A1-204ENST00000400337 TRAF5O00463 557 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 CCNT1O60563 726 aaKnown RBP20.48■□□□□ 0.87
COL18A1-204ENST00000400337 DCAF17Q5H9S7 520 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-204ENST00000400337 E7EWF7 191 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 BACH1O14867 736 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 NF2P35240 595 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 PDE4DQ08499 809 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 BAG1Q99933 345 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-204ENST00000400337 MAPK8IP1Q9UQF2 711 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 B4DLN1 442 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 KRT40Q6A162 431 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 CCDC97Q96F63 343 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-204ENST00000400337 GADD45BO75293 160 aaPredicted RBP20.48■□□□□ 0.87
COL18A1-204ENST00000400337 CCDC155Q8N6L0 562 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 HOMER2Q9NSB8 354 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 IKBKGQ9Y6K9 419 aa20.48■□□□□ 0.87
COL18A1-204ENST00000400337 SPATA31E1Q6ZUB1 1445 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 AKR1B15C9JRZ8 316 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-204ENST00000400337 TTC38Q5R3I4 469 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 NBPF14Q5TI25 921 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 TMEM87AQ8NBN3 555 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
COL18A1-204ENST00000400337 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 SH2D4AQ9H788 454 aa20.47■□□□□ 0.87
COL18A1-204ENST00000400337 CUTAO60888 179 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms