RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 PPANQ9NQ55 473 aaKnown RBP10.76□□□□□ -0.69
CSMD1-202ENST00000400186 FAM114A2Q9NRY5 505 aa10.76□□□□□ -0.69
CSMD1-202ENST00000400186 ZNF853P0CG23 659 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 AGTPBP1Q9UPW5 1226 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 VWA3AA6NCI4 1184 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 ARHGEF2Q92974 986 aaKnown RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 AKNAD1Q5T1N1 836 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 LEO1Q8WVC0 666 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 PTPDC1A2A3K4 754 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 SETSIPP0DME0 302 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 APOBRQ0VD83 1088 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 PLS1Q14651 629 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 PAXIP1Q6ZW49 1069 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 PHLDB2Q86SQ0 1253 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 NOS1P29475 1434 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 ADGRL1O94910 1474 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 TAOK1Q7L7X3 1001 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 CHST3Q7LGC8 479 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 GBP7Q8N8V2 638 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 MAGEB6P1A0A0J9YX57 407 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 CETN3O15182 167 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 GABPB1Q06547 395 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 ARHGAP24Q8N264 748 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 TTF2Q9UNY4 1162 aaKnown RBP10.75□□□□□ -0.69
CSMD1-202ENST00000400186 AFAP1L2Q8N4X5 818 aa10.75□□□□□ -0.69
CSMD1-202ENST00000400186 ERCC5P28715 1186 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 ITIH3Q06033 890 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 RASA3Q14644 834 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 PLIN2Q99541 437 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 TRAF5O00463 557 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 RNASE9P60153 205 aaKnown RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 ZNF804AQ7Z570 1209 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 SDCCAG8Q86SQ7 713 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 CCDC65Q8IXS2 484 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 ANXA1P04083 346 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 IL15P40933 162 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 B4DLN1 442 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 STK10O94804 968 aaKnown RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 MRPL12P52815 198 aaKnown RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 DHX32Q7L7V1 743 aaKnown RBP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 MAGEB6Q8N7X4 407 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 CNNM4Q6P4Q7 775 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.74□□□□□ -0.69
CSMD1-202ENST00000400186 XAGE3Q8WTP9 111 aa10.74□□□□□ -0.69
CSMD1-202ENST00000400186 A0A1B0GVL5 298 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RIOK3O14730 519 aaKnown RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PLCG2P16885 1265 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RFC1P35251 1148 aaPredicted RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 WDR44Q5JSH3 913 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PHF8Q9UPP1 1060 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 SOS1Q07889 1333 aaPredicted RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 ARID4AP29374 1257 aaPredicted RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 STX10O60499 249 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 DENND2CQ68D51 928 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RBM28Q9NW13 759 aaKnown RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 SBNO2Q9Y2G9 1366 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 BAZ2BQ9UIF8 2168 aaKnown RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 NOC4LQ9BVI4 516 aaKnown RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RNF113AO15541 343 aaKnown RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RILPL1Q5EBL4 403 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 RUFY4Q6ZNE9 571 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 HAUS7Q99871 368 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PLCB1Q9NQ66 1216 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 MYRIPQ8NFW9 859 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 IFNL2Q8IZJ0 200 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 KIF1BO60333 1816 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 PNMA8AQ86V59 439 aaPredicted RBP10.73□□□□□ -0.69
CSMD1-202ENST00000400186 ALDH1L1O75891 902 aa10.73□□□□□ -0.69
CSMD1-202ENST00000400186 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 ERCC3P19447 782 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 ZNF75DP51815 510 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 ATP8B2P98198 1209 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 FAM204AQ9H8W3 233 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 HGSO14964 777 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-202ENST00000400186 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 MSH6P52701 1360 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 SV2BQ7L1I2 683 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 BIRC3Q13489 604 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 PICALMQ13492 652 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 LIN9Q5TKA1 542 aa10.72□□□□□ -0.69
CSMD1-202ENST00000400186 IRX5P78411 483 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-202ENST00000400186 SATB1Q01826 763 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 MRRFQ96E11 262 aaKnown RBP10.71□□□□□ -0.69
CSMD1-202ENST00000400186 PSMD6Q15008 389 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-202ENST00000400186 KCNH3Q9ULD8 1083 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 RABGAP1Q9Y3P9 1069 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 F8W031 263 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-202ENST00000400186 FOXO3O43524 673 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 RFC4P35249 363 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 PLCD1P51178 756 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 TBC1D8BQ0IIM8 1120 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 PDE1CQ14123 709 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-202ENST00000400186 GBP5Q96PP8 586 aa10.71□□□□□ -0.69
CSMD1-202ENST00000400186 TRIM31Q9BZY9 425 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms