RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 ANGEL1Q9UNK9 670 aaKnown RBP3.7□□□□□ -1.82
KNL1-202ENST00000399668 EFCAB6Q5THR3 1501 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ARHGEF28Q8N1W1 1705 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 CHL1O00533 1208 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 NEMFO60524 1076 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 NR1I2O75469 434 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 MBD4O95243 580 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CAVIN2O95810 425 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 GRM1Q13255 1194 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 UBE4AQ14139 1066 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PUM3Q15397 648 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 TNNI3KQ59H18 835 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 FAM114A1Q8IWE2 563 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 LZTFL1Q9NQ48 299 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 FPGT-TNNI3KV9GXZ4 949 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 SPATA31E1Q6ZUB1 1445 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 TMEM110-MUSTN1A8MSY1 372 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 JAK2O60674 1132 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 GNAT2P19087 354 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 SP4Q02446 784 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CMTR1Q8N1G2 835 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 TTC16Q8NEE8 873 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 TBC1D5Q92609 795 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 GPCPD1Q9NPB8 672 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PIKFYVEQ9Y2I7 2098 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 MYOM2P54296 1465 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 OTOFQ9HC10 1997 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PSMA7O14818 248 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 RNF113AO15541 343 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 KCNQ3O43525 872 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ZNF174Q15697 407 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 UVSSAQ2YD98 709 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PLBD2Q8NHP8 589 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 FAM200AQ8TCP9 573 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 FERMT2Q96AC1 680 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 RRP36Q96EU6 259 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 XAGE2Q96GT9 111 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 SUCLG2Q96I99 432 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CAPZA3Q96KX2 299 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PSMD1Q99460 953 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 DBNDD2Q9BQY9 259 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 PYM1Q9BRP8 204 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 GBP3Q9H0R5 595 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ARMT1Q9H993 441 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 DOCK3Q8IZD9 2030 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 RTTNQ86VV8 2226 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 KDM2BQ8NHM5 1336 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ASXL3Q9C0F0 2248 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 GADD45BO75293 160 aaPredicted RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 GNAQP50148 359 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 DPH6Q7L8W6 267 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ALS2CR12Q96Q35 445 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 FAM107BQ9H098 131 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 RMND1Q9NWS8 449 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 MROH2AA6NES4 1674 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 RIMS1Q86UR5 1692 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 UNC13BO14795 1591 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CDC42BPGQ6DT37 1551 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 NEURL1BA8MQ27 555 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ZNF202O95125 648 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 LTKP29376 864 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 LETM2Q2VYF4 491 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CCDC174Q6PII3 467 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CDC37L1Q7L3B6 337 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 SMARCC1Q92922 1105 aaPredicted RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 MYL10Q9BUA6 226 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 ANKRD26Q9UPS8 1709 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 GOLGA6L7A0A1B0GV03 622 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 AKR1B10O60218 316 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 LMAN1P49257 510 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 DCAF17Q5H9S7 520 aaPredicted RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 HOOK3Q86VS8 718 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 CTAGE1Q96RT6 745 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 NAA15Q9BXJ9 866 aaKnown RBP3.69□□□□□ -1.82
KNL1-202ENST00000399668 SNX14Q9Y5W7 946 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 TAF1P21675 1872 aa3.69□□□□□ -1.82
KNL1-202ENST00000399668 MADDQ8WXG6 1647 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 HMGB2P26583 209 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 RNF187Q5TA31 235 aaPredicted RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 MAEAQ7L5Y9 396 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 RGS22Q8NE09 1264 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 PUS7Q96PZ0 661 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 PAIP2Q9BPZ3 127 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 USP44Q9H0E7 712 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 RBSNQ9H1K0 784 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 VPS16Q9H269 839 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 TAOK3Q9H2K8 898 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 SYNCQ9H7C4 482 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 GOLGA6L9A6NEM1 432 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 TBCAO75347 108 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 CTDSPL2Q05D32 466 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 RAD51AP2Q09MP3 1159 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 PKP1Q13835 747 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 ZYXQ15942 572 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 TRAPPC3LQ5T215 181 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 STXBP4Q6ZWJ1 553 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 APPBP2Q92624 585 aa3.68□□□□□ -1.82
KNL1-202ENST00000399668 ZNF496Q96IT1 587 aaPredicted RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 SRRTQ9BXP5 876 aaKnown RBP3.68□□□□□ -1.82
KNL1-202ENST00000399668 MIA3Q5JRA6 1907 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms