RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 BEND3Q5T5X7 828 aa22.89■■□□□ 1.25
UFD1-202ENST00000399523 FBXO33Q7Z6M2 555 aa22.89■■□□□ 1.25
UFD1-202ENST00000399523 TMOD2Q9NZR1 351 aa22.89■■□□□ 1.25
UFD1-202ENST00000399523 RPAP1Q9BWH6 1393 aaPredicted RBP22.89■■□□□ 1.25
UFD1-202ENST00000399523 SGPL1O95470 568 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 MNX1P50219 401 aaPredicted RBP22.88■■□□□ 1.25
UFD1-202ENST00000399523 PRKCZQ05513 592 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 MOGSQ13724 837 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 SLAIN1Q8ND83 568 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 TBC1D22AQ8WUA7 517 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 LRCH3Q96II8 777 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 ZNF341Q9BYN7 854 aa22.88■■□□□ 1.25
UFD1-202ENST00000399523 EVI5O60447 810 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 BCRP11274 1271 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 CAPN2P17655 700 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 INPP5BP32019 993 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 APOBEC3HQ6NTF7 200 aaKnown RBP22.87■■□□□ 1.25
UFD1-202ENST00000399523 UNC93B1Q9H1C4 597 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 MGAMO43451 1857 aa22.87■■□□□ 1.25
UFD1-202ENST00000399523 FCGRTP55899 365 aa22.86■■□□□ 1.25
UFD1-202ENST00000399523 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
UFD1-202ENST00000399523 MIGA2Q7L4E1 593 aa22.86■■□□□ 1.25
UFD1-202ENST00000399523 ZNF112Q9UJU3 913 aa22.86■■□□□ 1.25
UFD1-202ENST00000399523 GRM8O00222 908 aa22.85■■□□□ 1.25
UFD1-202ENST00000399523 PUS3Q9BZE2 481 aaKnown RBP22.85■■□□□ 1.25
UFD1-202ENST00000399523 PRKRIP1Q9H875 184 aaPredicted RBP22.85■■□□□ 1.25
UFD1-202ENST00000399523 IQSEC3Q9UPP2 1182 aaPredicted RBP22.85■■□□□ 1.25
UFD1-202ENST00000399523 F6X3S4 739 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 CHAF1AQ13111 956 aaPredicted RBP22.84■■□□□ 1.25
UFD1-202ENST00000399523 VPS37DQ86XT2 251 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 WWC1Q8IX03 1113 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 PARK7Q99497 189 aaKnown RBP22.84■■□□□ 1.25
UFD1-202ENST00000399523 STAP2Q9UGK3 403 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 GABRQQ9UN88 632 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 SUGT1Q9Y2Z0 365 aa22.84■■□□□ 1.25
UFD1-202ENST00000399523 GPAT2Q6NUI2 795 aa22.83■■□□□ 1.25
UFD1-202ENST00000399523 GPR153Q6NV75 609 aa22.83■■□□□ 1.25
UFD1-202ENST00000399523 HHIPL2Q6UWX4 724 aa22.83■■□□□ 1.25
UFD1-202ENST00000399523 IL16Q14005 1332 aa22.82■■□□□ 1.24
UFD1-202ENST00000399523 MROH5Q6ZUA9 1318 aa22.82■■□□□ 1.24
UFD1-202ENST00000399523 NOL9Q5SY16 702 aaKnown RBP22.82■■□□□ 1.24
UFD1-202ENST00000399523 MAST3O60307 1309 aa22.82■■□□□ 1.24
UFD1-202ENST00000399523 ADCY3O60266 1144 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 VAMP4O75379 141 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 FRAT2O75474 233 aaPredicted RBP22.81■■□□□ 1.24
UFD1-202ENST00000399523 CYP2C8P10632 490 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 CAVIN4Q5BKX8 364 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 PXYLP1Q8TE99 480 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 FAM151AQ8WW52 585 aa22.81■■□□□ 1.24
UFD1-202ENST00000399523 ALPK3Q96L96 1907 aa22.8■■□□□ 1.24
UFD1-202ENST00000399523 CXCL11O14625 94 aa22.8■■□□□ 1.24
UFD1-202ENST00000399523 TFRCP02786 760 aaKnown RBP22.8■■□□□ 1.24
UFD1-202ENST00000399523 BMP8BP34820 402 aa22.8■■□□□ 1.24
UFD1-202ENST00000399523 GDF15Q99988 308 aa22.8■■□□□ 1.24
UFD1-202ENST00000399523 CRISPLD2Q9H0B8 497 aa22.8■■□□□ 1.24
UFD1-202ENST00000399523 DOCK3Q8IZD9 2030 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 AK9Q5TCS8 1911 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 UNC80Q8N2C7 3258 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 INHAP05111 366 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 FLT3LGP49771 235 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 IRF5Q13568 498 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 DEFB118Q96PH6 123 aa22.79■■□□□ 1.24
UFD1-202ENST00000399523 PAK6Q9NQU5 681 aaPredicted RBP22.79■■□□□ 1.24
UFD1-202ENST00000399523 C9orf78Q9NZ63 289 aaPredicted RBP22.79■■□□□ 1.24
UFD1-202ENST00000399523 ELNP15502 786 aa22.78■■□□□ 1.24
UFD1-202ENST00000399523 KAZALD1Q96I82 304 aa22.78■■□□□ 1.24
UFD1-202ENST00000399523 ALDH1L1O75891 902 aa22.77■■□□□ 1.24
UFD1-202ENST00000399523 FANCIQ9NVI1 1328 aa22.77■■□□□ 1.24
UFD1-202ENST00000399523 BCAMP50895 628 aa22.76■■□□□ 1.23
UFD1-202ENST00000399523 FASTKD5Q7L8L6 764 aaKnown RBP22.76■■□□□ 1.23
UFD1-202ENST00000399523 VGLL2Q8N8G2 317 aa22.76■■□□□ 1.23
UFD1-202ENST00000399523 SUCLG2Q96I99 432 aa22.76■■□□□ 1.23
UFD1-202ENST00000399523 PAWRQ96IZ0 340 aaKnown RBP22.76■■□□□ 1.23
UFD1-202ENST00000399523 PDE8BO95263 885 aa22.75■■□□□ 1.23
UFD1-202ENST00000399523 TCP10Q12799 353 aa22.75■■□□□ 1.23
UFD1-202ENST00000399523 DEFB123Q8N688 67 aa22.75■■□□□ 1.23
UFD1-202ENST00000399523 STXBP5LQ9Y2K9 1186 aa22.75■■□□□ 1.23
UFD1-202ENST00000399523 SLC45A1Q9Y2W3 748 aa22.75■■□□□ 1.23
UFD1-202ENST00000399523 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
UFD1-202ENST00000399523 LRRC24Q50LG9 513 aa22.74■■□□□ 1.23
UFD1-202ENST00000399523 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
UFD1-202ENST00000399523 METTL24Q5JXM2 366 aa22.74■■□□□ 1.23
UFD1-202ENST00000399523 CDC42EP5Q6NZY7 148 aa22.74■■□□□ 1.23
UFD1-202ENST00000399523 NECAB2Q7Z6G3 386 aa22.74■■□□□ 1.23
UFD1-202ENST00000399523 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
UFD1-202ENST00000399523 KIF16BQ96L93 1317 aa22.74■■□□□ 1.23
UFD1-202ENST00000399523 TNPO2O14787 897 aaKnown RBP22.73■■□□□ 1.23
UFD1-202ENST00000399523 NFIAQ12857 509 aa22.73■■□□□ 1.23
UFD1-202ENST00000399523 LRIT3Q3SXY7 679 aa22.73■■□□□ 1.23
UFD1-202ENST00000399523 PHF20L1A8MW92 1017 aa22.72■■□□□ 1.23
UFD1-202ENST00000399523 RABL6Q3YEC7 729 aaPredicted RBP22.72■■□□□ 1.23
UFD1-202ENST00000399523 DIS3LQ8TF46 1054 aaKnown RBP22.72■■□□□ 1.23
UFD1-202ENST00000399523 FAM198AQ9UFP1 575 aa22.72■■□□□ 1.23
UFD1-202ENST00000399523 DAGLAQ9Y4D2 1042 aa22.72■■□□□ 1.23
UFD1-202ENST00000399523 ZHX2Q9Y6X8 837 aa22.72■■□□□ 1.23
UFD1-202ENST00000399523 EXOSC9Q06265 439 aaKnown RBP22.71■■□□□ 1.23
UFD1-202ENST00000399523 ANKLE1Q8NAG6 615 aa22.71■■□□□ 1.23
UFD1-202ENST00000399523 WDR66Q8TBY9 1149 aa22.71■■□□□ 1.23
UFD1-202ENST00000399523 SRCIN1Q9C0H9 1055 aa22.71■■□□□ 1.23
UFD1-202ENST00000399523 AFG3L2Q9Y4W6 797 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms