RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 SARNPP82979 210 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 PRPF38AQ8NAV1 312 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 KAT14Q9H8E8 782 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 MED4Q9NPJ6 270 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 SAMSN1Q9NSI8 373 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 PREX2Q70Z35 1606 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 CPLX2Q6PUV4 134 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 RSRC2Q7L4I2 434 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 RASSF8Q8NHQ8 419 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 ANKZF1Q9H8Y5 726 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 NLRP2Q9NX02 1062 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 DONSONQ9NYP3 566 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
ITSN1-210ENST00000399353 NAA16Q6N069 864 aaPredicted RBP16.89■□□□□ 0.29
ITSN1-210ENST00000399353 GOLGA6L7A0A1B0GV03 622 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 LINC00301Q8NCQ3 95 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 CABS1Q96KC9 395 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 GRAMD1CQ8IYS0 662 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
ITSN1-210ENST00000399353 N4BP3O15049 544 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 PDCLQ13371 301 aa16.88■□□□□ 0.29
ITSN1-210ENST00000399353 IQGAP1P46940 1657 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 TAF5LO75529 589 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 KAT2BQ92831 832 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 HDAC6Q9UBN7 1215 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 FOXN1O15353 648 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 SKAP2O75563 359 aaPredicted RBP16.87■□□□□ 0.29
ITSN1-210ENST00000399353 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 CEP89Q96ST8 783 aa16.87■□□□□ 0.29
ITSN1-210ENST00000399353 ODF2Q5BJF6 829 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 CEP85LQ5SZL2 805 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 MYD88Q99836 296 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 VPS16Q9H269 839 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
ITSN1-210ENST00000399353 HPDP32754 393 aaPredicted RBP16.86■□□□□ 0.29
ITSN1-210ENST00000399353 STAMQ92783 540 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 MYO6Q9UM54 1294 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 MAP2K7O14733 419 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 A1BGP04217 495 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 IFT88Q13099 833 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 AIFM3Q96NN9 605 aa16.86■□□□□ 0.29
ITSN1-210ENST00000399353 RBL2Q08999 1139 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 NCAPHQ15003 741 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 CDC42BPBQ9Y5S2 1711 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 TEX33O43247 280 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
ITSN1-210ENST00000399353 CCDC181Q5TID7 509 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 CASP14P31944 242 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 NEDD9Q14511 834 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
ITSN1-210ENST00000399353 RRP12Q5JTH9 1297 aaKnown RBP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 KCNH3Q9ULD8 1083 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 MACROD2A1Z1Q3 448 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 POLR2DO15514 142 aaKnown RBP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 GCKP35557 465 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 NAIF1Q69YI7 327 aaPredicted RBP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 TBC1D31Q96DN5 1066 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 MAPK8IP1Q9UQF2 711 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 UNC13BO14795 1591 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 EZRP15311 586 aaKnown RBP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
ITSN1-210ENST00000399353 DBF4Q9UBU7 674 aaPredicted RBP16.84■□□□□ 0.29
ITSN1-210ENST00000399353 ASXL2Q76L83 1435 aa16.83■□□□□ 0.29
ITSN1-210ENST00000399353 MYOM2P54296 1465 aa16.83■□□□□ 0.29
ITSN1-210ENST00000399353 ESCO1Q5FWF5 840 aa16.83■□□□□ 0.29
ITSN1-210ENST00000399353 ALG1Q9BT22 464 aa16.83■□□□□ 0.29
ITSN1-210ENST00000399353 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.29
ITSN1-210ENST00000399353 ADD1P35611 737 aaKnown RBP16.83■□□□□ 0.28
ITSN1-210ENST00000399353 IRAK1P51617 712 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 MCMDC2Q4G0Z9 681 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 TC2NQ8N9U0 490 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 PPANQ9NQ55 473 aaKnown RBP16.83■□□□□ 0.28
ITSN1-210ENST00000399353 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.28
ITSN1-210ENST00000399353 RTEL1Q9NZ71 1219 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 DACH1Q9UI36 760 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 TFR2Q9UP52 801 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 PPP1R12BO60237 982 aaPredicted RBP16.83■□□□□ 0.28
ITSN1-210ENST00000399353 PFKFB2O60825 505 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
ITSN1-210ENST00000399353 PAX7P23759 505 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 CCDC122Q5T0U0 273 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 RAD9BQ6WBX8 426 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 EEF2KMTQ96G04 330 aa16.83■□□□□ 0.28
ITSN1-210ENST00000399353 REREQ9P2R6 1566 aa16.82■□□□□ 0.28
ITSN1-210ENST00000399353 EIF4E1BA6NMX2 242 aaKnown RBP16.82■□□□□ 0.28
ITSN1-210ENST00000399353 IKBKBO14920 756 aa16.82■□□□□ 0.28
ITSN1-210ENST00000399353 SATB1Q01826 763 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms