RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ZSCAN16Q9H4T2 348 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-202ENST00000399127 DACT1Q9NYF0 836 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 KIF3AQ9Y496 699 aa13.78□□□□□ -0.2
COL25A1-202ENST00000399127 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 CPLX1O14810 134 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 NAA16Q6N069 864 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-202ENST00000399127 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 PROM2Q8N271 834 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 BSDC1Q9NW68 430 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-202ENST00000399127 RAI14Q9P0K7 980 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-202ENST00000399127 TACC3Q9Y6A5 838 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 SLC4A4Q9Y6R1 1079 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 TDO2P48775 406 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 RRP12Q5JTH9 1297 aaKnown RBP13.77□□□□□ -0.21
COL25A1-202ENST00000399127 TPTE2Q6XPS3 522 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 SLC51AQ86UW1 340 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 BICD2Q8TD16 824 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 MYL10Q9BUA6 226 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 TOMM22Q9NS69 142 aa13.77□□□□□ -0.21
COL25A1-202ENST00000399127 ANGEL1Q9UNK9 670 aaKnown RBP13.77□□□□□ -0.21
COL25A1-202ENST00000399127 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 CYP7A1P22680 504 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 ADD1P35611 737 aaKnown RBP13.76□□□□□ -0.21
COL25A1-202ENST00000399127 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
COL25A1-202ENST00000399127 LETM1O95202 739 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-202ENST00000399127 ILDR1Q86SU0 546 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-202ENST00000399127 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 PDLIM2Q96JY6 352 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 USP28Q96RU2 1077 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 ORC3Q9UBD5 711 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-202ENST00000399127 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-202ENST00000399127 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
COL25A1-202ENST00000399127 NR1I2O75469 434 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 NFIXQ14938 502 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 ZKSCAN3Q9BRR0 538 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 NUP62CLQ9H1M0 184 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 PRDM10Q9NQV6 1147 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
COL25A1-202ENST00000399127 SMIM22K7EJ46 135 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 RPS8P62241 208 aaKnown RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 CAVIN4Q5BKX8 364 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 NFXL1Q6ZNB6 911 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 AIFM3Q96NN9 605 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 TFCP2L1Q9NZI6 479 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 JAG2Q9Y219 1238 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 GOLGB1Q14789 3259 aaKnown RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 ZNF804BA4D1E1 1349 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 POLR3DP05423 398 aaPredicted RBP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL25A1-202ENST00000399127 UBE4AQ14139 1066 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 SLC10A5Q5PT55 438 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 MPNDQ8N594 471 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 PHKBQ93100 1093 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 C8orf76Q96K31 380 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
COL25A1-202ENST00000399127 ADRA2BP18089 450 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 ALX1Q15699 326 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 UTP14CQ5TAP6 766 aaKnown RBP13.73□□□□□ -0.21
COL25A1-202ENST00000399127 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 FBXO41Q8TF61 875 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 FAM13BQ9NYF5 915 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 USP25Q9UHP3 1055 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 RGL2O15211 777 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 CDC27P30260 824 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 PLCB2Q00722 1185 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 MFSD6Q6ZSS7 791 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 NACAP1Q9BZK3 213 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 TNMDQ9H2S6 317 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
COL25A1-202ENST00000399127 IFIT3O14879 490 aaKnown RBP13.72□□□□□ -0.21
COL25A1-202ENST00000399127 DYNLL1P63167 89 aaKnown RBP13.72□□□□□ -0.21
COL25A1-202ENST00000399127 MAP3K11Q16584 847 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 UBE2Q2LH0YL09 131 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 GYS1P13807 737 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 DMTNQ08495 405 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 FBXO18Q8NFZ0 1043 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 CHMP4CQ96CF2 233 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 TMEM51Q9NW97 253 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
COL25A1-202ENST00000399127 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
COL25A1-202ENST00000399127 ZBTB43O43298 467 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms