RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 KRT23Q9C075 422 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 NSRP1Q9H0G5 558 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 SYT1P21579 422 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 CKAP4Q07065 602 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 STXBP4Q6ZWJ1 553 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 ERMNQ8TAM6 284 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 GOLGA1Q92805 767 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 EYA1Q99502 592 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 PTPRCP08575 1304 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 NDC80O14777 642 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 AKR1B10O60218 316 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 SLU7O95391 586 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 TTC30AQ86WT1 665 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 PPANQ9NQ55 473 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 GGA1Q9UJY5 639 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 LRRC43Q8N309 656 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 TSC1Q92574 1164 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 IMPG2Q9BZV3 1241 aa10.52□□□□□ -0.73
ATL3-201ENST00000398868 NCOA5Q9HCD5 579 aaKnown RBP10.52□□□□□ -0.73
ATL3-201ENST00000398868 CTAGE9A4FU28 777 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 NEMFO60524 1076 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 PARP1P09874 1014 aaKnown RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 UBLCP1Q8WVY7 318 aaPredicted RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 ZNF569Q5MCW4 686 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 C4orf50Q6ZRC1 276 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 CEP120Q8N960 986 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 PPP1R9BQ96SB3 815 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
ATL3-201ENST00000398868 TTC22Q5TAA0 569 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 CCDC102BQ68D86 513 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 GUCA1BQ9UMX6 200 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 UBE2HP62256 183 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 ALDH1L2Q3SY69 923 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 STAMQ92783 540 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 APOL6Q9BWW8 343 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 VIMP08670 466 aaKnown RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 CTAGE5O15320 804 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 NOL3O60936 208 aaKnown RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 KRT2P35908 639 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 TXKP42681 527 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 OTUD7BQ6GQQ9 843 aa10.51□□□□□ -0.73
ATL3-201ENST00000398868 QTRT2Q9H974 415 aaKnown RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 FEZ2Q9UHY8 353 aaPredicted RBP10.51□□□□□ -0.73
ATL3-201ENST00000398868 TIAM1Q13009 1591 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 LRMPQ12912 555 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 CCDC170Q8IYT3 715 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 TACO1Q9BSH4 297 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 DDX19AQ9NUU7 478 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 OGFRQ9NZT2 677 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 GEN1Q17RS7 908 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 KSR2Q6VAB6 950 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 PIK3AP1Q6ZUJ8 805 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 SMAP1Q8IYB5 467 aaPredicted RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 IQCGQ9H095 443 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 USTQ9Y2C2 406 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 STK25O00506 426 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 PEX19P40855 299 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 PSMD6Q15008 389 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 DYMQ7RTS9 669 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 NIM1KQ8IY84 436 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 ABT1Q9ULW3 272 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 ZKSCAN5Q9Y2L8 839 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 KIF3CO14782 793 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 OPA1O60313 960 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 TCIRG1Q13488 830 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 SH2B1Q9NRF2 756 aaPredicted RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 RNMTO43148 476 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 UTP14CQ5TAP6 766 aaKnown RBP10.5□□□□□ -0.73
ATL3-201ENST00000398868 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
ATL3-201ENST00000398868 UBXN2AP68543 259 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 UBXN1Q04323 297 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 CEP85LQ5SZL2 805 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 TAB3Q8N5C8 712 aaPredicted RBP10.49□□□□□ -0.73
ATL3-201ENST00000398868 RAB3IL1Q8TBN0 382 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 HOXC9P31274 260 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 GBP7Q8N8V2 638 aaPredicted RBP10.49□□□□□ -0.73
ATL3-201ENST00000398868 PHKBQ93100 1093 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 EYA3Q99504 573 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 C19orf44Q9H6X5 657 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 COX16Q9P0S2 106 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 PPP1R12AO14974 1030 aaPredicted RBP10.49□□□□□ -0.73
ATL3-201ENST00000398868 MORC4Q8TE76 937 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 RIMS2Q9UQ26 1411 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 SPICE1Q8N0Z3 855 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 SMC6Q96SB8 1091 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 MAK16Q9BXY0 300 aaKnown RBP10.49□□□□□ -0.73
ATL3-201ENST00000398868 CTNND2Q9UQB3 1225 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 TESPA1A2RU30 521 aaPredicted RBP10.49□□□□□ -0.73
ATL3-201ENST00000398868 NCAPG2Q86XI2 1143 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 FAM76AQ8TAV0 307 aa10.49□□□□□ -0.73
ATL3-201ENST00000398868 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms