RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 IFNKQ9P0W0 207 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 GLI2P10070 1586 aa16.16■□□□□ 0.18
PCDHGA11-201ENST00000398587 SIRT2Q8IXJ6 389 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 GPR108Q9NPR9 543 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 V9GY48 417 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 TTLL12Q14166 644 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 OTUD7BQ6GQQ9 843 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 AKNAD1Q5T1N1 836 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 ZNF274Q96GC6 653 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 NEFHP12036 1026 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 LRRC24Q50LG9 513 aa16.15■□□□□ 0.18
PCDHGA11-201ENST00000398587 PTGS1P23219 599 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 KRT40Q6A162 431 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 GIGYF2Q6Y7W6 1299 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 MADDQ8WXG6 1647 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 CUTAO60888 179 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 DNA2P51530 1060 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 KCNH3Q9ULD8 1083 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 BICDL2A1A5D9 508 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 STX17P56962 302 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 ZNF174Q15697 407 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 NAA15Q9BXJ9 866 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 DNAI1Q9UI46 699 aa16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 DBNLQ9UJU6 430 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 HSPD1P10809 573 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDHGA11-201ENST00000398587 CTDSPL2Q05D32 466 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 SEC62Q99442 399 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 MRPL12P52815 198 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 LSG1Q9H089 658 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 ALKQ9UM73 1620 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 WDHD1O75717 1129 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 PDE6AP16499 860 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 UNC5CLQ8IV45 518 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 SAP30BPQ9UHR5 308 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 ADGRB3O60242 1522 aa16.13■□□□□ 0.17
PCDHGA11-201ENST00000398587 CIAO1O76071 339 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 MAST3O60307 1309 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 RGS12O14924 1447 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 SEPT7Q16181 437 aaKnown RBP16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 NAP1L4Q99733 375 aaKnown RBP16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 VEZTQ9HBM0 779 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 ABCA9Q8IUA7 1624 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 KIAA0754O94854 1291 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 CCDC175P0C221 793 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 USP8P40818 1118 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 PHKBQ93100 1093 aa16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA11-201ENST00000398587 PLCD1P51178 756 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 TMCO5BA8MYB1 307 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 USP21Q9UK80 565 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 TPCN1Q9ULQ1 816 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 LMTK2Q8IWU2 1503 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 DTNBO60941 627 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 PDE8BO95263 885 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 SIK1P57059 783 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 IFI16Q16666 785 aaKnown RBP16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 LETM2Q2VYF4 491 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 JDP2Q8WYK2 163 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 DNAI2Q9GZS0 605 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 TMEM63CQ9P1W3 806 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 PFKFB2O60825 505 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 TBC1D22AQ8WUA7 517 aa16.11■□□□□ 0.17
PCDHGA11-201ENST00000398587 LIG1P18858 919 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 PPP1R2P41236 205 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 TAX1BP1Q86VP1 789 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 CCDC24Q8N4L8 307 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 SRRTQ9BXP5 876 aaKnown RBP16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 PNPLA6Q8IY17 1366 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 ZNF202O95125 648 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 MMRN2Q9H8L6 949 aa16.1■□□□□ 0.17
PCDHGA11-201ENST00000398587 PIK3AP1Q6ZUJ8 805 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 USP37Q86T82 979 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 FGAP02671 866 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 CBX1P83916 185 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 TTC38Q5R3I4 469 aa16.09■□□□□ 0.17
PCDHGA11-201ENST00000398587 GREM2Q9H772 168 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms