RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 PRAMEF18Q5VWM3 479 aa17.42■□□□□ 0.38
HDDC2-202ENST00000398153 RGMBQ6NW40 437 aa17.42■□□□□ 0.38
HDDC2-202ENST00000398153 TBC1D9Q6ZT07 1266 aa17.42■□□□□ 0.38
HDDC2-202ENST00000398153 CAPNS2Q96L46 248 aa17.42■□□□□ 0.38
HDDC2-202ENST00000398153 RPAP1Q9BWH6 1393 aaPredicted RBP17.41■□□□□ 0.38
HDDC2-202ENST00000398153 TCP10L2B9ZVM9 353 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 ZAP70P43403 619 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 CDC42EP5Q6NZY7 148 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 CERS3Q8IU89 383 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 IDI2Q9BXS1 227 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 USP40Q9NVE5 1235 aa17.41■□□□□ 0.38
HDDC2-202ENST00000398153 NPM3O75607 178 aaKnown RBP17.4■□□□□ 0.38
HDDC2-202ENST00000398153 ATP5JP18859 108 aa17.4■□□□□ 0.38
HDDC2-202ENST00000398153 NOGQ13253 232 aa17.4■□□□□ 0.38
HDDC2-202ENST00000398153 TTLL12Q14166 644 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-202ENST00000398153 NAA16Q6N069 864 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-202ENST00000398153 PAXIP1Q6ZW49 1069 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-202ENST00000398153 FAM151AQ8WW52 585 aa17.4■□□□□ 0.38
HDDC2-202ENST00000398153 TEPSINQ96N21 525 aa17.4■□□□□ 0.38
HDDC2-202ENST00000398153 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
HDDC2-202ENST00000398153 ENTPD3O75355 529 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 BAG3O95817 575 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 PLCG2P16885 1265 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 ZNF157P51786 506 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 MAP2K1Q02750 393 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 MAP3K12Q12852 859 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 LDLRAD1Q5T700 205 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 NBPF12Q5TAG4 269 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 CYP4F22Q6NT55 531 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 REM2Q8IYK8 340 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 ZNF384Q8TF68 577 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 NOL10Q9BSC4 688 aaKnown RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-202ENST00000398153 THSD7BQ9C0I4 1608 aa17.39■□□□□ 0.37
HDDC2-202ENST00000398153 BTDP43251 543 aa17.38■□□□□ 0.37
HDDC2-202ENST00000398153 IREB2P48200 963 aaKnown RBP17.38■□□□□ 0.37
HDDC2-202ENST00000398153 TMEM39BQ9GZU3 492 aa17.38■□□□□ 0.37
HDDC2-202ENST00000398153 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-202ENST00000398153 CACNB3P54284 484 aa17.37■□□□□ 0.37
HDDC2-202ENST00000398153 PPP4CP60510 307 aa17.37■□□□□ 0.37
HDDC2-202ENST00000398153 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
HDDC2-202ENST00000398153 ECHDC1Q9NTX5 307 aa17.37■□□□□ 0.37
HDDC2-202ENST00000398153 ANGEL1Q9UNK9 670 aaKnown RBP17.37■□□□□ 0.37
HDDC2-202ENST00000398153 DOCK2Q92608 1830 aa17.37■□□□□ 0.37
HDDC2-202ENST00000398153 SSC5DA1L4H1 1573 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 FAM155AB1AL88 458 aaPredicted RBP17.36■□□□□ 0.37
HDDC2-202ENST00000398153 UBE2Q2LH0YL09 131 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 IDH1O75874 414 aaKnown RBP17.36■□□□□ 0.37
HDDC2-202ENST00000398153 SLC10A3P09131 477 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 ANKRD13AQ8IZ07 590 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 EXOC6Q8TAG9 804 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 HAUS7Q99871 368 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 FAM198AQ9UFP1 575 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 PCNTO95613 3336 aa17.36■□□□□ 0.37
HDDC2-202ENST00000398153 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-202ENST00000398153 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-202ENST00000398153 RHBDL3P58872 404 aa17.35■□□□□ 0.37
HDDC2-202ENST00000398153 TTC41PQ6P2S7 1318 aa17.35■□□□□ 0.37
HDDC2-202ENST00000398153 RFX7Q2KHR2 1363 aa17.35■□□□□ 0.37
HDDC2-202ENST00000398153 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
HDDC2-202ENST00000398153 COL2A1P02458 1487 aaPredicted RBP17.34■□□□□ 0.37
HDDC2-202ENST00000398153 RGS3P49796 1198 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 NFIAQ12857 509 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 PAG1Q9NWQ8 432 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
HDDC2-202ENST00000398153 MYO5AQ9Y4I1 1855 aaKnown RBP17.34■□□□□ 0.37
HDDC2-202ENST00000398153 GOLIM4O00461 696 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 ERC2O15083 957 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 CA12O43570 354 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 CYP7A1P22680 504 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 TCP10Q12799 353 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 GRM1Q13255 1194 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 PRKG1Q13976 671 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 RASAL3Q86YV0 1011 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 SMC5Q8IY18 1101 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 SLC10A4Q96EP9 437 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 DNAJC2Q99543 621 aaKnown RBP17.33■□□□□ 0.36
HDDC2-202ENST00000398153 BEGAINQ9BUH8 593 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDDC2-202ENST00000398153 BOLA2Q9H3K6 86 aa17.33■□□□□ 0.36
HDDC2-202ENST00000398153 ATRNL1Q5VV63 1379 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 ZBTB48P10074 688 aaPredicted RBP17.32■□□□□ 0.36
HDDC2-202ENST00000398153 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 MAGEB6Q8N7X4 407 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 AIDAQ96BJ3 306 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 AATFQ9NY61 560 aaKnown RBP eCLIP17.32■□□□□ 0.36
HDDC2-202ENST00000398153 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
HDDC2-202ENST00000398153 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
HDDC2-202ENST00000398153 AOC2O75106 756 aa17.31■□□□□ 0.36
HDDC2-202ENST00000398153 MAP3K10Q02779 954 aa17.31■□□□□ 0.36
HDDC2-202ENST00000398153 SLC9C2Q5TAH2 1124 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms