RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 RRAGBQ5VZM2 374 aa12.69□□□□□ -0.38
CSGALNACT1-202ENST00000397998 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
CSGALNACT1-202ENST00000397998 APPBP2Q92624 585 aa12.69□□□□□ -0.38
CSGALNACT1-202ENST00000397998 EPC1Q9H2F5 836 aa12.69□□□□□ -0.38
CSGALNACT1-202ENST00000397998 TRMT112Q9UI30 125 aaKnown RBP12.69□□□□□ -0.38
CSGALNACT1-202ENST00000397998 ARHGEF28Q8N1W1 1705 aaKnown RBP12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 EFCAB8A8MWE9 144 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 GUCA1BQ9UMX6 200 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 A1BGP04217 495 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 DIS3L2Q8IYB7 885 aaKnown RBP12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 FAM89AQ96GI7 184 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MROH1Q8NDA8 1641 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 SPECC1LQ69YQ0 1117 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
CSGALNACT1-202ENST00000397998 PIK3C2BO00750 1634 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MAST3O60307 1309 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 USP42Q9H9J4 1324 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CUTAO60888 179 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 TTF1Q15361 905 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CTR9Q6PD62 1173 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 GPR161Q8N6U8 529 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 DNA2P51530 1060 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 LONRF3Q496Y0 759 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 STOX1Q6ZVD7 989 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 FMR1NBQ8N0W7 255 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 STAMQ92783 540 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 RASSF4Q9H2L5 321 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MATR3P43243 847 aaKnown RBP eCLIP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 PDE4CQ08493 712 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 POSTNQ15063 836 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 E4F1Q66K89 784 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CAPZA3Q96KX2 299 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CENPHQ9H3R5 247 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 ZCCHC17Q9NP64 241 aaKnown RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 IQSEC3Q9UPP2 1182 aaPredicted RBP12.67□□□□□ -0.38
CSGALNACT1-202ENST00000397998 TRIM75PA6NK02 468 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 HNRNPH2P55795 449 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 ARMCX5Q6P1M9 558 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 HDXQ7Z353 690 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 SERTAD1Q9UHV2 236 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 COL9A3Q14050 684 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 PUS3Q9BZE2 481 aaKnown RBP12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 VPS16Q9H269 839 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 JADE2Q9NQC1 790 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 SLC39A14Q15043 492 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MLKLQ8NB16 471 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 OSBP2Q969R2 916 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 OSBPL5Q9H0X9 879 aaPredicted RBP12.66□□□□□ -0.38
CSGALNACT1-202ENST00000397998 NLRP5P59047 1200 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 GYS2P54840 703 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 TTLL7Q6ZT98 887 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 CMTR1Q8N1G2 835 aaKnown RBP12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 SMARCC2Q8TAQ2 1214 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 DCAF5Q96JK2 942 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 MAPK8IP1Q9UQF2 711 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 M0R2C6 588 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 IVLP07476 585 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
CSGALNACT1-202ENST00000397998 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.39
CSGALNACT1-202ENST00000397998 BTBD18B2RXH4 712 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 STARD3NLO95772 234 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 DRC1Q96MC2 740 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SLC4A4Q9Y6R1 1079 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TMEM232C9JQI7 657 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IKBKBO14920 756 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PIP4K2BP78356 416 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SPA17Q15506 151 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RNF41Q9H4P4 317 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 USP31Q70CQ4 1352 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 OVOS2A0A0J9YW53 1432 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 OVOS2Q6IE36 1432 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SLFN14P0C7P3 912 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 ADORA1P30542 326 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TSGA10IPQ3SY00 556 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PI16Q6UXB8 463 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IQCA1Q86XH1 822 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
CSGALNACT1-202ENST00000397998 RILPL1Q5EBL4 403 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 KRT23Q9C075 422 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 PHLPP2Q6ZVD8 1323 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 hCG_1642624A0A1W2PR95 340 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 SLC5A1P13866 664 aa12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
CSGALNACT1-202ENST00000397998 CNGA4Q8IV77 575 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms