RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 PRDX5P30044 214 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 PHKA1P46020 1223 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 SP3Q02447 781 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 TAF1CQ15572 869 aaPredicted RBP17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 DIXDC1Q155Q3 683 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 INTS3Q68E01 1043 aaKnown RBP17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 ERO1BQ86YB8 467 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 FAM151AQ8WW52 585 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 ZNF341Q9BYN7 854 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 ZFYVE28Q9HCC9 887 aa17.74■□□□□ 0.43
SNRNP25-203ENST00000397876 CETPP11597 493 aa17.73■□□□□ 0.43
SNRNP25-203ENST00000397876 ZGPATQ8N5A5 531 aaKnown RBP17.73■□□□□ 0.43
SNRNP25-203ENST00000397876 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
SNRNP25-203ENST00000397876 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
SNRNP25-203ENST00000397876 IPO8O15397 1037 aaKnown RBP17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 SRGAP3O43295 1099 aa17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 PPIL2Q13356 520 aa17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 SNAPC2Q13487 334 aa17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 CDC42EP5Q6NZY7 148 aa17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 PTPN22Q9Y2R2 807 aa17.72■□□□□ 0.43
SNRNP25-203ENST00000397876 ZBTB22O15209 634 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 ADORA1P30542 326 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 TCP10Q12799 353 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 ARHGEF6Q15052 776 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 CCDC102BQ68D86 513 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 MIGA2Q7L4E1 593 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
SNRNP25-203ENST00000397876 IRF6O14896 467 aa17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 NFIAQ12857 509 aa17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 MTX1Q13505 466 aa17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 DZIP1Q86YF9 867 aaKnown RBP17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 PDS5AQ29RF7 1337 aaKnown RBP17.7■□□□□ 0.42
SNRNP25-203ENST00000397876 INPP5BP32019 993 aa17.69■□□□□ 0.42
SNRNP25-203ENST00000397876 PPATQ06203 517 aa17.69■□□□□ 0.42
SNRNP25-203ENST00000397876 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
SNRNP25-203ENST00000397876 AK9Q5TCS8 1911 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 BTBD19C9JJ37 291 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 TRIM27P14373 513 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 TIMM10P62072 90 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 TFCP2Q12800 502 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 MVPQ14764 893 aaKnown RBP17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 SLF2Q8IX21 1173 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 FRAT1Q92837 279 aaPredicted RBP17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 FAM198AQ9UFP1 575 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 ABCF2Q9UG63 623 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
SNRNP25-203ENST00000397876 MYH2Q9UKX2 1941 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 TLR2O60603 784 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 SLC34A2O95436 690 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 GNAI2P04899 355 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 PRPF38BQ5VTL8 546 aaKnown RBP17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 SPTY2D1Q68D10 685 aaPredicted RBP17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 XAGE2Q96GT9 111 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 ZNF112Q9UJU3 913 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 GAKO14976 1311 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 HTTP42858 3142 aa17.67■□□□□ 0.42
SNRNP25-203ENST00000397876 ENTPD3O75355 529 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 RGS3P49796 1198 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 KIF22Q14807 665 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 NOL9Q5SY16 702 aaKnown RBP17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 ARMC5Q96C12 935 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 RBBP6Q7Z6E9 1792 aaKnown RBP17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 RFX7Q2KHR2 1363 aa17.66■□□□□ 0.42
SNRNP25-203ENST00000397876 BCAR3O75815 825 aa17.65■□□□□ 0.42
SNRNP25-203ENST00000397876 CAP1Q01518 475 aa17.65■□□□□ 0.42
SNRNP25-203ENST00000397876 GORABQ5T7V8 394 aa17.65■□□□□ 0.42
SNRNP25-203ENST00000397876 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
SNRNP25-203ENST00000397876 KCNH4Q9UQ05 1017 aa17.65■□□□□ 0.42
SNRNP25-203ENST00000397876 BTDP43251 543 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 ANKRD23Q86SG2 305 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 ZSCAN29Q8IWY8 852 aaPredicted RBP17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 ZFPM1Q8IX07 1006 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 MROH7-TTC4A0A0A0MT08 1334 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 ATRNL1Q5VV63 1379 aa17.64■□□□□ 0.41
SNRNP25-203ENST00000397876 POTEFA5A3E0 1075 aa17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 LACTBP83111 547 aaPredicted RBP17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 G3BP1Q13283 466 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 SLC9C1Q4G0N8 1177 aa17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 PTCH2Q9Y6C5 1203 aa17.63■□□□□ 0.41
SNRNP25-203ENST00000397876 PDHXO00330 501 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 PICALMQ13492 652 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 NBPF11Q86T75 865 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 ZNF333Q96JL9 665 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 PICK1Q9NRD5 415 aa17.62■□□□□ 0.41
SNRNP25-203ENST00000397876 PNMA6EA0A0J9YXQ4 647 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 GNRH1P01148 92 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 GSTO1P78417 241 aa17.61■□□□□ 0.41
SNRNP25-203ENST00000397876 MECOMQ03112 1051 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms