RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 PROX2Q3B8N5 592 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 LHFPL2Q6ZUX7 228 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 PASD1Q8IV76 773 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 CLASRPQ8N2M8 674 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 RIN3Q8TB24 985 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 JPH3Q8WXH2 748 aaPredicted RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 MYO19Q96H55 970 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 CAMKK2Q96RR4 588 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 TNKS2Q9H2K2 1166 aa8.26□□□□□ -1.09
SMCO1-201ENST00000397537 DIS3Q9Y2L1 958 aaKnown RBP8.26□□□□□ -1.09
SMCO1-201ENST00000397537 CUL7Q14999 1698 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 PHLDB1Q86UU1 1377 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 PTPRGP23470 1445 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 GJB6O95452 261 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 ZAP70P43403 619 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 CRKP46108 304 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 SCNN1DP51172 638 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 ITKQ08881 620 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 SSRP1Q08945 709 aaKnown RBP8.25□□□□□ -1.09
SMCO1-201ENST00000397537 TCIRG1Q13488 830 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 PWP1Q13610 501 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 PRPF40BQ6NWY9 871 aaKnown RBP8.25□□□□□ -1.09
SMCO1-201ENST00000397537 LVRNQ6Q4G3 990 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
SMCO1-201ENST00000397537 GREM1O60565 184 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 RFPL1O75677 317 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 GARTP22102 1010 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 CASP7P55210 303 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 C8orf34Q49A92 452 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 TBCELQ5QJ74 424 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ARMC3Q5W041 872 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 GPR153Q6NV75 609 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 CASC1Q6TDU7 716 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 SERINC2Q96SA4 455 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 MAPRE3Q9UPY8 281 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 HCN4Q9Y3Q4 1203 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 POTECB2RU33 542 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ABLIM3O94929 683 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 FAM160A1Q05DH4 1040 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 PUM3Q15397 648 aaKnown RBP8.24□□□□□ -1.09
SMCO1-201ENST00000397537 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
SMCO1-201ENST00000397537 MMS22LQ6ZRQ5 1243 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ZBTB46Q86UZ6 589 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ZNF354CQ86Y25 554 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ZSWIM2Q8NEG5 633 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 SCLT1Q96NL6 688 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 ELAC2Q9BQ52 826 aaKnown RBP8.24□□□□□ -1.09
SMCO1-201ENST00000397537 TRIM8Q9BZR9 551 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 BCL2L12Q9HB09 334 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 PLCB1Q9NQ66 1216 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
SMCO1-201ENST00000397537 YEATS2Q9ULM3 1422 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 APAF1O14727 1248 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 ZSCAN20P17040 1043 aaPredicted RBP8.23□□□□□ -1.09
SMCO1-201ENST00000397537 JUNDP17535 347 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 GIPRP48546 466 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 TMEM67Q5HYA8 995 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 TOGARAM2Q6ZUX3 1019 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 NECAB2Q7Z6G3 386 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 FTSJ3Q8IY81 847 aaKnown RBP8.23□□□□□ -1.09
SMCO1-201ENST00000397537 RHOVQ96L33 236 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 TARS2Q9BW92 718 aaKnown RBP8.23□□□□□ -1.09
SMCO1-201ENST00000397537 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 SRCIN1Q9C0H9 1055 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 RETREG1Q9H6L5 497 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 SLC5A4Q9NY91 659 aa8.23□□□□□ -1.09
SMCO1-201ENST00000397537 MORC2Q9Y6X9 1032 aaPredicted RBP8.23□□□□□ -1.09
SMCO1-201ENST00000397537 RIMS1Q86UR5 1692 aaKnown RBP8.23□□□□□ -1.09
SMCO1-201ENST00000397537 MAGI3Q5TCQ9 1506 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 FIBPO43427 364 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 RHOBTB3O94955 611 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 FXNQ16595 210 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 PPP4R3AQ6IN85 833 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 USP33Q8TEY7 942 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 ZSWIM6Q9HCJ5 1215 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 EVA1BQ9NVM1 165 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 SAGE1Q9NXZ1 904 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 GJA3Q9Y6H8 435 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 LTBP4Q8N2S1 1624 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 TTC36A6NLP5 189 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 CT47B1P0C2W7 299 aaPredicted RBP8.22□□□□□ -1.09
SMCO1-201ENST00000397537 FAM153BP0C7A2 387 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 TYRP1P17643 537 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 SCTRP47872 440 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 CDC37Q16543 378 aaPredicted RBP8.22□□□□□ -1.09
SMCO1-201ENST00000397537 DDX46Q7L014 1031 aaKnown RBP8.22□□□□□ -1.09
SMCO1-201ENST00000397537 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 TTC14Q96N46 770 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 BCO2Q9BYV7 579 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 CWC25Q9NXE8 425 aaPredicted RBP8.22□□□□□ -1.09
SMCO1-201ENST00000397537 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
SMCO1-201ENST00000397537 STRCQ7RTU9 1775 aa8.22□□□□□ -1.09
SMCO1-201ENST00000397537 UHRF1BP1LA0JNW5 1464 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms