RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RNF20Q5VTR2 975 aa25.28■■□□□ 1.64
CPNE1-204ENST00000397443 CIAPIN1Q6FI81 312 aa25.28■■□□□ 1.64
CPNE1-204ENST00000397443 TMED8Q6PL24 325 aaPredicted RBP25.28■■□□□ 1.64
CPNE1-204ENST00000397443 IFNL3Q8IZI9 196 aa25.28■■□□□ 1.64
CPNE1-204ENST00000397443 IGSF3O75054 1194 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 CYP21A2P08686 494 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 TDO2P48775 406 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 TEKT1Q969V4 418 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 CRNKL1Q9BZJ0 848 aaKnown RBP25.27■■□□□ 1.64
CPNE1-204ENST00000397443 NAPBQ9H115 298 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 PCDHAC2Q9Y5I4 1007 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 LMNB1P20700 586 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 CRKP46108 304 aa25.27■■□□□ 1.64
CPNE1-204ENST00000397443 GAKO14976 1311 aa25.26■■□□□ 1.63
CPNE1-204ENST00000397443 GPR75-ASB3A0A0A6YYF3 556 aa25.26■■□□□ 1.63
CPNE1-204ENST00000397443 NACAP1Q9BZK3 213 aa25.26■■□□□ 1.63
CPNE1-204ENST00000397443 EIF6P56537 245 aaKnown RBP25.25■■□□□ 1.63
CPNE1-204ENST00000397443 ADCK5Q3MIX3 580 aa25.25■■□□□ 1.63
CPNE1-204ENST00000397443 FAM163AQ96GL9 167 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-204ENST00000397443 CTNNA3Q9UI47 895 aa25.25■■□□□ 1.63
CPNE1-204ENST00000397443 GJA3Q9Y6H8 435 aa25.25■■□□□ 1.63
CPNE1-204ENST00000397443 ANAPC15P60006 121 aa25.25■■□□□ 1.63
CPNE1-204ENST00000397443 IMMTQ16891 758 aaKnown RBP25.24■■□□□ 1.63
CPNE1-204ENST00000397443 UPF3BQ9BZI7 483 aaKnown RBP25.24■■□□□ 1.63
CPNE1-204ENST00000397443 MYO3BQ8WXR4 1341 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 USP5P45974 858 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 PPP4CP60510 307 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 TNIP1Q15025 636 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 SLC4A8Q2Y0W8 1093 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 TEX11Q8IYF3 940 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 TGFBRAP1Q8WUH2 860 aa25.24■■□□□ 1.63
CPNE1-204ENST00000397443 JAKMIP1Q96N16 626 aaKnown RBP25.24■■□□□ 1.63
CPNE1-204ENST00000397443 BAZ2AQ9UIF9 1905 aaKnown RBP25.23■■□□□ 1.63
CPNE1-204ENST00000397443 HHIPL2Q6UWX4 724 aa25.23■■□□□ 1.63
CPNE1-204ENST00000397443 STK11IPQ8N1F8 1099 aa25.23■■□□□ 1.63
CPNE1-204ENST00000397443 RNF181Q9P0P0 153 aa25.23■■□□□ 1.63
CPNE1-204ENST00000397443 ZNF541Q9H0D2 1346 aa25.23■■□□□ 1.63
CPNE1-204ENST00000397443 FZD9O00144 591 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 ZNF213O14771 459 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 SBF1O95248 1867 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 CPA1P15085 419 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 KCNB2Q92953 911 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 GMLQ99445 158 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 CASTP20810 708 aaKnown RBP25.22■■□□□ 1.63
CPNE1-204ENST00000397443 RHBDL3P58872 404 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 RABEP1Q15276 862 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 APOBEC3HQ6NTF7 200 aaKnown RBP25.22■■□□□ 1.63
CPNE1-204ENST00000397443 MAPKAPK5Q8IW41 473 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 OGFOD1Q8N543 542 aa25.22■■□□□ 1.63
CPNE1-204ENST00000397443 DCP1AQ9NPI6 582 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-204ENST00000397443 MINDY4BA8MYZ0 360 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 ALX1Q15699 326 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 CFAP100Q494V2 611 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 DDRGK1Q96HY6 314 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 USP40Q9NVE5 1235 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 SERPINA10Q9UK55 444 aa25.21■■□□□ 1.63
CPNE1-204ENST00000397443 CYP2D7A0A087X1C5 515 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 SHTN1A0MZ66 631 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 PLCG2P16885 1265 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 NEK4P51957 841 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 COL9A3Q14050 684 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-204ENST00000397443 STOX1Q6ZVD7 989 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 AGBL3Q8NEM8 1001 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 ZDHHC15Q96MV8 337 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 USP17L8P0C7I0 530 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 CTDSPL2Q05D32 466 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 PICALMQ13492 652 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 HDAC9Q9UKV0 1011 aa25.2■■□□□ 1.62
CPNE1-204ENST00000397443 SMIM22K7EJ46 135 aa25.19■■□□□ 1.62
CPNE1-204ENST00000397443 CDC42EP5Q6NZY7 148 aa25.19■■□□□ 1.62
CPNE1-204ENST00000397443 ATP8A2Q9NTI2 1148 aa25.19■■□□□ 1.62
CPNE1-204ENST00000397443 MCM9Q9NXL9 1143 aa25.19■■□□□ 1.62
CPNE1-204ENST00000397443 RPAP1Q9BWH6 1393 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-204ENST00000397443 USP17L12C9JPN9 530 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 USP17L21D6R901 530 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 E7EWF7 191 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 CACNB3P54284 484 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 HDLBPQ00341 1268 aaKnown RBP25.18■■□□□ 1.62
CPNE1-204ENST00000397443 C9orf131Q5VYM1 1079 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 NBPF3Q9H094 633 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 SAP30BPQ9UHR5 308 aaKnown RBP25.18■■□□□ 1.62
CPNE1-204ENST00000397443 DICER1Q9UPY3 1922 aaKnown RBP25.18■■□□□ 1.62
CPNE1-204ENST00000397443 GMPSP49915 693 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-204ENST00000397443 EVX2Q03828 476 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 CERS3Q8IU89 383 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 TBC1D10CQ8IV04 446 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 MRIQ9BWK5 157 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 ZMYM6O95789 1325 aa25.18■■□□□ 1.62
CPNE1-204ENST00000397443 CD2BP2O95400 341 aaKnown RBP25.17■■□□□ 1.62
CPNE1-204ENST00000397443 CYP2D6P10635 497 aa25.17■■□□□ 1.62
CPNE1-204ENST00000397443 CTR9Q6PD62 1173 aa25.17■■□□□ 1.62
CPNE1-204ENST00000397443 INCENPQ9NQS7 918 aa25.17■■□□□ 1.62
CPNE1-204ENST00000397443 CDK5RAP2Q96SN8 1893 aa25.17■■□□□ 1.62
CPNE1-204ENST00000397443 PPARAQ07869 468 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 KRT32Q14532 448 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 TSGA10IPQ3SY00 556 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 PRMT6Q96LA8 375 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-204ENST00000397443 TCEANC2Q96MN5 208 aa25.16■■□□□ 1.62
CPNE1-204ENST00000397443 TDRD3Q9H7E2 651 aaKnown RBP25.16■■□□□ 1.62
CPNE1-204ENST00000397443 FLT1P17948 1338 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms