RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 KINO60870 393 aaKnown RBP27.67■■■□□ 2.02
PABPN1-202ENST00000397276 RRP12Q5JTH9 1297 aaKnown RBP27.67■■■□□ 2.02
PABPN1-202ENST00000397276 MYH7P12883 1935 aa27.67■■■□□ 2.02
PABPN1-202ENST00000397276 CDC27P30260 824 aa27.66■■■□□ 2.02
PABPN1-202ENST00000397276 STK38Q15208 465 aa27.66■■■□□ 2.02
PABPN1-202ENST00000397276 LRP2BPQ9P2M1 347 aa27.66■■■□□ 2.02
PABPN1-202ENST00000397276 ATL3Q6DD88 541 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 APOA5Q6Q788 366 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 TRIM5Q9C035 493 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 ATRNO75882 1429 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 SPDYE4A6NLX3 237 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 DRC7Q8IY82 874 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 LCORLQ8N3X6 602 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 TACC3Q9Y6A5 838 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 TMEM67Q5HYA8 995 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 KIAA1524Q8TCG1 905 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 ZKSCAN3Q9BRR0 538 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 RTEL1Q9NZ71 1219 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 ZSWIM5Q9P217 1185 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 ABCF2Q9UG63 623 aa27.65■■■□□ 2.02
PABPN1-202ENST00000397276 UBE2Q2LH0YL09 131 aa27.64■■■□□ 2.02
PABPN1-202ENST00000397276 FAM160A1Q05DH4 1040 aa27.64■■■□□ 2.02
PABPN1-202ENST00000397276 C11orf57Q6ZUT1 292 aaPredicted RBP27.64■■■□□ 2.02
PABPN1-202ENST00000397276 LINC00301Q8NCQ3 95 aa27.64■■■□□ 2.02
PABPN1-202ENST00000397276 ENGASEQ8NFI3 743 aa27.64■■■□□ 2.02
PABPN1-202ENST00000397276 ALG1Q9BT22 464 aa27.64■■■□□ 2.02
PABPN1-202ENST00000397276 MYSM1Q5VVJ2 828 aa27.64■■■□□ 2.01
PABPN1-202ENST00000397276 SYNE3Q6ZMZ3 975 aa27.64■■■□□ 2.01
PABPN1-202ENST00000397276 IGDCC4Q8TDY8 1250 aa27.64■■■□□ 2.01
PABPN1-202ENST00000397276 SLC4A4Q9Y6R1 1079 aa27.64■■■□□ 2.01
PABPN1-202ENST00000397276 ZMYM6O95789 1325 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 SPATA31A5Q5VU36 1347 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 SPATA31A7Q8IWB4 1347 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 GSG1L2A8MUP6 293 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 C3orf67Q6ZVT6 689 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 PLCH1Q4KWH8 1693 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 WDR19Q8NEZ3 1342 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 RIOK3O14730 519 aaKnown RBP27.63■■■□□ 2.01
PABPN1-202ENST00000397276 TDO2P48775 406 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 FAM98CQ17RN3 349 aaKnown RBP27.63■■■□□ 2.01
PABPN1-202ENST00000397276 ERFEQ4G0M1 354 aa27.63■■■□□ 2.01
PABPN1-202ENST00000397276 IFIT3O14879 490 aaKnown RBP27.62■■■□□ 2.01
PABPN1-202ENST00000397276 ZBTB43O43298 467 aa27.62■■■□□ 2.01
PABPN1-202ENST00000397276 GYG1P46976 350 aa27.62■■■□□ 2.01
PABPN1-202ENST00000397276 NDUFA8P51970 172 aa27.62■■■□□ 2.01
PABPN1-202ENST00000397276 MRPS27Q92552 414 aaKnown RBP27.62■■■□□ 2.01
PABPN1-202ENST00000397276 LY9Q9HBG7 655 aa27.62■■■□□ 2.01
PABPN1-202ENST00000397276 KIF23Q02241 960 aaPredicted RBP27.61■■■□□ 2.01
PABPN1-202ENST00000397276 SDF4Q9BRK5 362 aa27.61■■■□□ 2.01
PABPN1-202ENST00000397276 ADALQ6DHV7 355 aa27.61■■■□□ 2.01
PABPN1-202ENST00000397276 PTGS1P23219 599 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 DMTNQ08495 405 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 NRBP1Q9UHY1 535 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 MYH14Q7Z406 1995 aaKnown RBP27.6■■■□□ 2.01
PABPN1-202ENST00000397276 GOLGA8AA7E2F4 631 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 SPTLC2O15270 562 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 AHDC1Q5TGY3 1603 aaPredicted RBP27.6■■■□□ 2.01
PABPN1-202ENST00000397276 MARCKSP29966 332 aaPredicted RBP27.6■■■□□ 2.01
PABPN1-202ENST00000397276 CCDC82Q8N4S0 544 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 TDRD7Q8NHU6 1098 aaKnown RBP27.6■■■□□ 2.01
PABPN1-202ENST00000397276 TMEM87BQ96K49 555 aa27.6■■■□□ 2.01
PABPN1-202ENST00000397276 CTAGE5O15320 804 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 GNL2Q13823 731 aaKnown RBP27.59■■■□□ 2.01
PABPN1-202ENST00000397276 MFSD6Q6ZSS7 791 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 ZNF652Q9Y2D9 606 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 GOLGA6L6A8MZA4 724 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 GTF2E1P29083 439 aaPredicted RBP27.59■■■□□ 2.01
PABPN1-202ENST00000397276 ALX1Q15699 326 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 PTF1AQ7RTS3 328 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 BRAPQ7Z569 592 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 FMR1NBQ8N0W7 255 aaPredicted RBP27.59■■■□□ 2.01
PABPN1-202ENST00000397276 LINC00116Q8NCU8 138 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 SLC12A7Q9Y666 1083 aa27.59■■■□□ 2.01
PABPN1-202ENST00000397276 GOLGA6L19H0YKK7 550 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 AKNAD1Q5T1N1 836 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 KRT40Q6A162 431 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 CPLX2Q6PUV4 134 aaKnown RBP27.58■■■□□ 2.01
PABPN1-202ENST00000397276 CCDC186Q7Z3E2 898 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 SDR42E1Q8WUS8 393 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 COL22A1Q8NFW1 1626 aaPredicted RBP27.58■■■□□ 2.01
PABPN1-202ENST00000397276 CCDC69A6NI79 296 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 CYP7A1P22680 504 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 ADGRA1Q86SQ6 560 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 POLR3EQ9NVU0 708 aa27.58■■■□□ 2.01
PABPN1-202ENST00000397276 RANBP6O60518 1105 aaKnown RBP27.57■■■□□ 2
PABPN1-202ENST00000397276 IARSP41252 1262 aaKnown RBP27.57■■■□□ 2
PABPN1-202ENST00000397276 STX1AQ16623 288 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 VPS37DQ86XT2 251 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 CCDC24Q8N4L8 307 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 KCNG4Q8TDN1 519 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 RAI14Q9P0K7 980 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 ZNF75DP51815 510 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 ANO1Q5XXA6 986 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 CDC5LQ99459 802 aaKnown RBP27.57■■■□□ 2
PABPN1-202ENST00000397276 SLC26A6Q9BXS9 759 aa27.57■■■□□ 2
PABPN1-202ENST00000397276 FAM217BQ9NTX9 383 aaPredicted RBP27.57■■■□□ 2
PABPN1-202ENST00000397276 LRP5O75197 1615 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 SMIM22K7EJ46 135 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 CDKL5O76039 1030 aa27.56■■■□□ 2
PABPN1-202ENST00000397276 IQCB1Q15051 598 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 342.3 ms